Analysis of interatomic Contacts of Structural Units in PDB entry:
1MXS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1MXS entry

There is 1 chain in PDB entry 1MXS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 11ASN 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1MXS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 28Right-handed alpha
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
40 51Right-handed alpha
Helix 4
4
A
64 76Right-handed alpha
Helix 5
5
A
88 99Right-handed alpha
Helix 6
6
A
109 119Right-handed alpha
Helix 7
7
A
129 138Right-handed alpha
Helix 8
8
A
148 153Right-handed alpha
Helix 9
9
A
153 163Right-handed alpha
Helix 10
10
A
180 187Right-handed alpha
Helix 11
11
A
200 206Right-handed alpha
Helix 12
12
A
208 222Right-handed alpha
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There are 3 sheets in PDB entry 1MXS. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
55 59parallel
Strand 3
A
29 33parallel
Strand 4
A
193 195parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
123 124parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
143 146parallel
Strand 3
A
169 172parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il