Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1N7S entry
There are 4 chains in PDB entry 1N7S
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
GLY 27 | TRP 89 |
B
|
GLY 189 | LYS 256 |
C
|
GLY 5 | LYS 83 |
D
|
GLY 139 | GLY 204 |
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There are 4
helices in PDB entry 1N7S. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 28 |
89 | Right-handed alpha |
Helix 2 |
2 | B
| 191 |
255 | Right-handed alpha |
Helix 3 |
3 | C
| 6 |
83 | Right-handed alpha |
Helix 4 |
4 | D
| 141 |
202 | Right-handed alpha |
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There are no sheets in PDB entry
1N7S
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il