Analysis of interatomic Contacts of Structural Units in PDB entry:
1NBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NBH entry

There are 4 chains in PDB entry 1NBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1GLY 292
B
 VAL 1GLY 292
C
 VAL 1GLY 292
D
 VAL 1GLY 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 1NBH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 29Right-handed alpha
Helix 2
2
A
29 35Right-handed alpha
Helix 3
3
A
36 55Right-handed alpha
Helix 4
4
A
68 77Right-handed alpha
Helix 5
5
A
87 101Right-handed alpha
Helix 6
6
A
104 109Right-handed alpha
Helix 7
7
A
116 118Right-handed 310
Helix 8
8
A
119 124Right-handed alpha
Helix 9
9
A
139 143Right-handed 310
Helix 10
10
A
150 162Right-handed alpha
Helix 11
11
A
176 184Right-handed alpha
Helix 12
12
A
246 258Right-handed alpha
Helix 13
13
B
24 29Right-handed alpha
Helix 14
14
B
29 35Right-handed alpha
Helix 15
15
B
36 43Right-handed alpha
Helix 16
16
B
44 55Right-handed alpha
Helix 17
17
B
68 77Right-handed alpha
Helix 18
18
B
87 101Right-handed alpha
Helix 19
19
B
104 109Right-handed alpha
Helix 20
20
B
116 118Right-handed 310
Helix 21
21
B
119 124Right-handed alpha
Helix 22
22
B
139 143Right-handed 310
Helix 23
23
B
150 162Right-handed alpha
Helix 24
24
B
176 184Right-handed alpha
Helix 25
25
B
246 258Right-handed alpha
Helix 26
26
C
24 35Right-handed alpha
Helix 27
27
C
36 43Right-handed alpha
Helix 28
28
C
44 55Right-handed alpha
Helix 29
29
C
68 77Right-handed alpha
Helix 30
30
C
87 101Right-handed alpha
Helix 31
31
C
104 109Right-handed alpha
Helix 32
32
C
116 118Right-handed 310
Helix 33
33
C
119 124Right-handed alpha
Helix 34
34
C
139 143Right-handed 310
Helix 35
35
C
150 162Right-handed alpha
Helix 36
36
C
176 184Right-handed alpha
Helix 37
37
C
246 258Right-handed alpha
Helix 38
38
D
24 29Right-handed alpha
Helix 39
39
D
29 35Right-handed alpha
Helix 40
40
D
36 43Right-handed alpha
Helix 41
41
D
44 55Right-handed alpha
Helix 42
42
D
68 77Right-handed alpha
Helix 43
43
D
87 101Right-handed alpha
Helix 44
44
D
104 109Right-handed alpha
Helix 45
45
D
116 118Right-handed 310
Helix 46
46
D
119 124Right-handed alpha
Helix 47
47
D
139 143Right-handed 310
Helix 48
48
D
150 162Right-handed alpha
Helix 49
49
D
176 184Right-handed alpha
Helix 50
50
D
246 258Right-handed alpha
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There are 6 sheets in PDB entry 1NBH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
80 85parallel
Strand 3
A
59 62parallel
Strand 4
A
130 135parallel
Strand 5
A
164 175parallel
Strand 6
A
283 290anti-parallel
Strand 7
A
262 267anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
199 203first strand
Strand 2
D
212 223anti-parallel
Strand 3
D
235 242anti-parallel
Strand 4
D
212 223anti-parallel
Strand 5
D
205 209anti-parallel
Strand 6
A
206 209anti-parallel
Strand 7
A
212 223anti-parallel
Strand 8
A
235 242anti-parallel
Strand 9
A
212 223anti-parallel
Strand 10
A
199 203anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 114first strand
Strand 2
B
80 85parallel
Strand 3
B
59 62parallel
Strand 4
B
130 135parallel
Strand 5
B
164 175parallel
Strand 6
B
283 290anti-parallel
Strand 7
B
262 267anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
199 203first strand
Strand 2
C
212 223anti-parallel
Strand 3
C
235 242anti-parallel
Strand 4
C
212 223anti-parallel
Strand 5
C
205 209anti-parallel
Strand 6
B
206 209anti-parallel
Strand 7
B
212 223anti-parallel
Strand 8
B
235 242anti-parallel
Strand 9
B
212 223anti-parallel
Strand 10
B
199 203anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 114first strand
Strand 2
C
80 85parallel
Strand 3
C
59 62parallel
Strand 4
C
130 135parallel
Strand 5
C
164 175parallel
Strand 6
C
283 290anti-parallel
Strand 7
C
262 267anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 114first strand
Strand 2
D
80 85parallel
Strand 3
D
59 62parallel
Strand 4
D
130 135parallel
Strand 5
D
164 175parallel
Strand 6
D
283 290anti-parallel
Strand 7
D
262 267anti-parallel
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