Analysis of interatomic Contacts of Structural Units in PDB entry:
1NF6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NF6 entry

There are 16 chains in PDB entry 1NF6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 3VAL 172
B
GLY 3VAL 172
C
GLY 3VAL 172
D
GLY 3VAL 172
E
GLY 3VAL 172
F
ALA 2VAL 172
G
ASN 4VAL 172
H
GLY 3VAL 172
I
GLY 3VAL 172
J
GLY 3VAL 172
K
ASN 4VAL 172
L
GLY 3VAL 172
M
ASN 4VAL 172
N
GLY 3VAL 172
O
ARG 5THR 173
P
GLY 3VAL 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 1NF6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
4 40Right-handed alpha
Helix 2
2
A
42 70Right-handed alpha
Helix 3
3
A
87 116Right-handed alpha
Helix 4
4
A
118 150Right-handed alpha
Helix 5
5
A
150 158Right-handed alpha
Helix 6
6
B
4 40Right-handed alpha
Helix 7
7
B
42 70Right-handed alpha
Helix 8
8
B
87 116Right-handed alpha
Helix 9
9
B
118 150Right-handed alpha
Helix 10
10
B
150 158Right-handed alpha
Helix 11
11
C
4 41Right-handed alpha
Helix 12
12
C
42 70Right-handed alpha
Helix 13
13
C
87 116Right-handed alpha
Helix 14
14
C
118 150Right-handed alpha
Helix 15
15
C
150 158Right-handed alpha
Helix 16
16
D
4 41Right-handed alpha
Helix 17
17
D
42 70Right-handed alpha
Helix 18
18
D
87 116Right-handed alpha
Helix 19
19
D
118 158Right-handed alpha
Helix 20
20
E
4 41Right-handed alpha
Helix 21
21
E
42 70Right-handed alpha
Helix 22
22
E
87 116Right-handed alpha
Helix 23
23
E
118 158Right-handed alpha
Helix 24
24
F
4 40Right-handed alpha
Helix 25
25
F
42 70Right-handed alpha
Helix 26
26
F
87 116Right-handed alpha
Helix 27
27
F
118 150Right-handed alpha
Helix 28
28
F
150 158Right-handed alpha
Helix 29
29
G
4 41Right-handed alpha
Helix 30
30
G
42 70Right-handed alpha
Helix 31
31
G
87 116Right-handed alpha
Helix 32
32
G
118 158Right-handed alpha
Helix 33
33
H
4 40Right-handed alpha
Helix 34
34
H
42 70Right-handed alpha
Helix 35
35
H
87 116Right-handed alpha
Helix 36
36
H
118 150Right-handed alpha
Helix 37
37
H
150 158Right-handed alpha
Helix 38
38
I
4 41Right-handed alpha
Helix 39
39
I
42 71Right-handed alpha
Helix 40
40
I
87 116Right-handed alpha
Helix 41
41
I
118 158Right-handed alpha
Helix 42
42
J
4 40Right-handed alpha
Helix 43
43
J
42 70Right-handed alpha
Helix 44
44
J
87 116Right-handed alpha
Helix 45
45
J
118 150Right-handed alpha
Helix 46
46
J
150 155Right-handed alpha
Helix 47
47
K
4 41Right-handed alpha
Helix 48
48
K
42 70Right-handed alpha
Helix 49
49
K
87 116Right-handed alpha
Helix 50
50
K
118 158Right-handed alpha
Helix 51
51
L
4 40Right-handed alpha
Helix 52
52
L
42 70Right-handed alpha
Helix 53
53
L
87 116Right-handed alpha
Helix 54
54
L
118 149Right-handed alpha
Helix 55
55
L
150 158Right-handed alpha
Helix 56
56
M
4 40Right-handed alpha
Helix 57
57
M
42 70Right-handed alpha
Helix 58
58
M
87 116Right-handed alpha
Helix 59
59
M
118 150Right-handed alpha
Helix 60
60
M
150 158Right-handed alpha
Helix 61
61
N
4 41Right-handed alpha
Helix 62
62
N
42 70Right-handed alpha
Helix 63
63
N
87 116Right-handed alpha
Helix 64
64
N
118 150Right-handed alpha
Helix 65
65
N
150 158Right-handed alpha
Helix 66
66
O
5 40Right-handed alpha
Helix 67
67
O
42 70Right-handed alpha
Helix 68
68
O
87 116Right-handed alpha
Helix 69
69
O
118 149Right-handed alpha
Helix 70
70
O
150 158Right-handed alpha
Helix 71
71
P
4 41Right-handed alpha
Helix 72
72
P
42 70Right-handed alpha
Helix 73
73
P
87 116Right-handed alpha
Helix 74
74
P
118 158Right-handed alpha
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There are no sheets in PDB entry 1NF6

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