Analysis of interatomic Contacts of Structural Units in PDB entry:
1NVE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NVE entry

There are 4 chains in PDB entry 1NVE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3PRO 393
B
 ASN 3PRO 393
C
 PRO 4PRO 393
D
 ASN 3ALA 392
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 76 helices in PDB entry 1NVE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed alpha
Helix 2
2
A
25 34Right-handed alpha
Helix 3
3
A
45 64Right-handed alpha
Helix 4
4
A
80 84Right-handed 310
Helix 5
5
A
85 99Right-handed alpha
Helix 6
6
A
114 128Right-handed alpha
Helix 7
7
A
129 131Right-handed 310
Helix 8
8
A
140 146Right-handed alpha
Helix 9
9
A
178 182Right-handed 310
Helix 10
10
A
184 203Right-handed alpha
Helix 11
11
A
203 223Right-handed alpha
Helix 12
12
A
235 256Right-handed alpha
Helix 13
13
A
262 267Right-handed alpha
Helix 14
14
A
270 282Right-handed alpha
Helix 15
15
A
286 305Right-handed alpha
Helix 16
16
A
309 323Right-handed alpha
Helix 17
17
A
331 338Right-handed alpha
Helix 18
18
A
344 353Right-handed alpha
Helix 19
19
A
383 392Right-handed alpha
Helix 20
20
B
20 25Right-handed alpha
Helix 21
21
B
25 34Right-handed alpha
Helix 22
22
B
45 64Right-handed alpha
Helix 23
23
B
80 84Right-handed 310
Helix 24
24
B
85 98Right-handed alpha
Helix 25
25
B
114 128Right-handed alpha
Helix 26
26
B
129 131Right-handed 310
Helix 27
27
B
140 146Right-handed alpha
Helix 28
28
B
178 182Right-handed 310
Helix 29
29
B
184 203Right-handed alpha
Helix 30
30
B
203 223Right-handed alpha
Helix 31
31
B
235 256Right-handed alpha
Helix 32
32
B
262 269Right-handed 310
Helix 33
33
B
270 282Right-handed alpha
Helix 34
34
B
286 305Right-handed alpha
Helix 35
35
B
309 323Right-handed alpha
Helix 36
36
B
331 338Right-handed alpha
Helix 37
37
B
344 354Right-handed alpha
Helix 38
38
B
383 392Right-handed alpha
Helix 39
39
C
25 34Right-handed alpha
Helix 40
40
C
45 64Right-handed alpha
Helix 41
41
C
80 84Right-handed 310
Helix 42
42
C
85 98Right-handed alpha
Helix 43
43
C
114 128Right-handed alpha
Helix 44
44
C
129 131Right-handed 310
Helix 45
45
C
140 146Right-handed alpha
Helix 46
46
C
178 182Right-handed 310
Helix 47
47
C
184 203Right-handed alpha
Helix 48
48
C
203 223Right-handed alpha
Helix 49
49
C
235 257Right-handed alpha
Helix 50
50
C
258 260Right-handed 310
Helix 51
51
C
263 269Right-handed 310
Helix 52
52
C
270 282Right-handed alpha
Helix 53
53
C
286 305Right-handed alpha
Helix 54
54
C
309 323Right-handed alpha
Helix 55
55
C
331 339Right-handed alpha
Helix 56
56
C
344 352Right-handed alpha
Helix 57
57
C
383 392Right-handed alpha
Helix 58
58
D
20 25Right-handed alpha
Helix 59
59
D
25 34Right-handed alpha
Helix 60
60
D
45 64Right-handed alpha
Helix 61
61
D
80 84Right-handed 310
Helix 62
62
D
85 99Right-handed alpha
Helix 63
63
D
114 128Right-handed alpha
Helix 64
64
D
129 131Right-handed 310
Helix 65
65
D
140 146Right-handed alpha
Helix 66
66
D
178 182Right-handed 310
Helix 67
67
D
184 203Right-handed alpha
Helix 68
68
D
203 223Right-handed alpha
Helix 69
69
D
235 257Right-handed alpha
Helix 70
70
D
262 269Right-handed 310
Helix 71
71
D
270 282Right-handed alpha
Helix 72
72
D
286 305Right-handed alpha
Helix 73
73
D
309 323Right-handed alpha
Helix 74
74
D
331 336Right-handed alpha
Helix 75
75
D
344 353Right-handed alpha
Helix 76
76
D
383 392Right-handed alpha
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There are 13 sheets in PDB entry 1NVE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 9first strand
Strand 2
A
12 18anti-parallel
Strand 3
A
172 176parallel
Strand 4
A
133 138parallel
Strand 5
A
108 113parallel
Strand 6
A
38 44parallel
Strand 7
A
71 77parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 157first strand
Strand 2
A
160 167anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 370first strand
Strand 2
A
373 374anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
13 18anti-parallel
Strand 3
B
172 176parallel
Strand 4
B
133 138parallel
Strand 5
B
108 113parallel
Strand 6
B
38 44parallel
Strand 7
B
71 77parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 157first strand
Strand 2
B
160 167anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
364 365first strand
Strand 2
B
380 381anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 370first strand
Strand 2
B
373 374anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 8first strand
Strand 2
C
13 18anti-parallel
Strand 3
C
172 176parallel
Strand 4
C
133 138parallel
Strand 5
C
108 113parallel
Strand 6
C
38 44parallel
Strand 7
C
71 77parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
152 157first strand
Strand 2
C
160 167anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
368 370first strand
Strand 2
C
373 374anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 9first strand
Strand 2
D
12 18anti-parallel
Strand 3
D
172 176parallel
Strand 4
D
133 138parallel
Strand 5
D
108 113parallel
Strand 6
D
38 44parallel
Strand 7
D
71 77parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
152 157first strand
Strand 2
D
160 167anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
368 370first strand
Strand 2
D
373 374anti-parallel
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