Analysis of interatomic Contacts of Structural Units in PDB entry:
1NX0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NX0 entry

There are 5 chains in PDB entry 1NX0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 94SER 266
B
GLU 394SER 566
C
ASP 601SER 612
D
ASP 701THR 711
E
ALA 801ALA 805
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1NX0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
94 108Right-handed alpha
Helix 2
2
A
114 128Right-handed alpha
Helix 3
3
A
138 150Right-handed alpha
Helix 4
4
A
158 180Right-handed alpha
Helix 5
5
A
191 199Right-handed alpha
Helix 6
6
A
204 216Right-handed alpha
Helix 7
7
A
223 245Right-handed alpha
Helix 8
8
A
256 265Right-handed alpha
Helix 9
9
B
394 408Right-handed alpha
Helix 10
10
B
414 428Right-handed alpha
Helix 11
11
B
438 450Right-handed alpha
Helix 12
12
B
458 480Right-handed alpha
Helix 13
13
B
491 500Right-handed alpha
Helix 14
14
B
505 516Right-handed alpha
Helix 15
15
B
523 543Right-handed alpha
Helix 16
16
B
556 565Right-handed alpha
Helix 17
17
C
601 608Right-handed alpha
Helix 18
18
D
701 710Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1NX0.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
251 255first strand
Strand 2
B
551 555anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il