Analysis of interatomic Contacts of Structural Units in PDB entry:
1NZX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1NZX entry

There are 8 chains in PDB entry 1NZX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 7SER 500
B
ALA 7SER 500
C
ALA 7SER 500
D
ALA 7SER 500
E
ALA 7SER 500
F
ALA 7SER 500
G
ALA 7SER 500
H
ALA 7SER 500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are152 helices in PDB entry 1NZX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
55 71Right-handed alpha
Helix 2
2
A
74 79Right-handed alpha
Helix 3
3
A
80 98Right-handed alpha
Helix 4
4
A
98 111Right-handed alpha
Helix 5
5
A
113 120Right-handed alpha
Helix 6
6
A
120 134Right-handed alpha
Helix 7
7
A
170 185Right-handed alpha
Helix 8
8
A
198 212Right-handed alpha
Helix 9
9
A
227 235Right-handed alpha
Helix 10
10
A
246 260Right-handed alpha
Helix 11
11
A
282 296Right-handed alpha
Helix 12
12
A
297 300Right-handed 310
Helix 13
13
A
312 329Right-handed alpha
Helix 14
14
A
346 363Right-handed alpha
Helix 15
15
A
393 398Right-handed alpha
Helix 16
16
A
412 422Right-handed alpha
Helix 17
17
A
435 446Right-handed alpha
Helix 18
18
A
468 470Right-handed 310
Helix 19
19
A
478 484Right-handed 310
Helix 20
20
B
55 70Right-handed alpha
Helix 21
21
B
74 79Right-handed alpha
Helix 22
22
B
80 98Right-handed alpha
Helix 23
23
B
98 111Right-handed alpha
Helix 24
24
B
113 120Right-handed alpha
Helix 25
25
B
120 134Right-handed alpha
Helix 26
26
B
170 185Right-handed alpha
Helix 27
27
B
198 212Right-handed alpha
Helix 28
28
B
227 235Right-handed alpha
Helix 29
29
B
246 260Right-handed alpha
Helix 30
30
B
282 296Right-handed alpha
Helix 31
31
B
297 300Right-handed 310
Helix 32
32
B
312 328Right-handed alpha
Helix 33
33
B
346 363Right-handed alpha
Helix 34
34
B
393 398Right-handed alpha
Helix 35
35
B
412 422Right-handed alpha
Helix 36
36
B
435 446Right-handed alpha
Helix 37
37
B
468 470Right-handed 310
Helix 38
38
B
478 484Right-handed 310
Helix 39
39
C
55 70Right-handed alpha
Helix 40
40
C
74 79Right-handed alpha
Helix 41
41
C
80 98Right-handed alpha
Helix 42
42
C
98 111Right-handed alpha
Helix 43
43
C
113 120Right-handed alpha
Helix 44
44
C
120 136Right-handed alpha
Helix 45
45
C
170 185Right-handed alpha
Helix 46
46
C
198 212Right-handed alpha
Helix 47
47
C
227 234Right-handed alpha
Helix 48
48
C
246 260Right-handed alpha
Helix 49
49
C
282 296Right-handed alpha
Helix 50
50
C
297 300Right-handed 310
Helix 51
51
C
312 329Right-handed alpha
Helix 52
52
C
346 363Right-handed alpha
Helix 53
53
C
393 398Right-handed alpha
Helix 54
54
C
412 422Right-handed alpha
Helix 55
55
C
435 446Right-handed alpha
Helix 56
56
C
468 470Right-handed 310
Helix 57
57
C
478 484Right-handed 310
Helix 58
58
D
55 70Right-handed alpha
Helix 59
59
D
74 79Right-handed alpha
Helix 60
60
D
80 98Right-handed alpha
Helix 61
61
D
98 111Right-handed alpha
Helix 62
62
D
113 120Right-handed alpha
Helix 63
63
D
120 134Right-handed alpha
Helix 64
64
D
170 185Right-handed alpha
Helix 65
65
D
198 212Right-handed alpha
Helix 66
66
D
227 235Right-handed alpha
Helix 67
67
D
246 260Right-handed alpha
Helix 68
68
D
282 296Right-handed alpha
Helix 69
69
D
297 300Right-handed 310
Helix 70
70
D
312 329Right-handed alpha
Helix 71
71
D
346 363Right-handed alpha
Helix 72
72
D
393 398Right-handed alpha
Helix 73
73
D
412 422Right-handed alpha
Helix 74
74
D
435 446Right-handed alpha
Helix 75
75
D
468 470Right-handed 310
Helix 76
76
D
478 484Right-handed 310
Helix 77
77
E
55 70Right-handed alpha
Helix 78
78
E
74 79Right-handed alpha
Helix 79
79
E
80 98Right-handed alpha
Helix 80
80
E
98 111Right-handed alpha
Helix 81
81
E
113 120Right-handed alpha
Helix 82
82
E
120 136Right-handed alpha
Helix 83
83
E
170 185Right-handed alpha
Helix 84
84
E
198 212Right-handed alpha
Helix 85
85
E
227 235Right-handed alpha
Helix 86
86
E
246 260Right-handed alpha
Helix 87
87
E
282 296Right-handed alpha
Helix 88
88
E
297 300Right-handed 310
Helix 89
89
E
312 329Right-handed alpha
Helix 90
90
E
346 363Right-handed alpha
Helix 91
91
E
393 398Right-handed alpha
Helix 92
92
E
412 422Right-handed alpha
Helix 93
93
E
435 446Right-handed alpha
Helix 94
94
E
468 470Right-handed 310
Helix 95
95
E
478 484Right-handed 310
Helix 96
96
F
55 70Right-handed alpha
Helix 97
97
F
74 79Right-handed alpha
Helix 98
98
F
80 98Right-handed alpha
Helix 99
99
F
98 111Right-handed alpha
Helix 100
100
F
113 120Right-handed alpha
Helix 101
101
F
120 136Right-handed alpha
Helix 102
102
F
170 185Right-handed alpha
Helix 103
103
F
198 212Right-handed alpha
Helix 104
104
F
227 234Right-handed alpha
Helix 105
105
F
246 260Right-handed alpha
Helix 106
106
F
282 296Right-handed alpha
Helix 107
107
F
297 300Right-handed 310
Helix 108
108
F
312 329Right-handed alpha
Helix 109
109
F
346 363Right-handed alpha
Helix 110
110
F
393 398Right-handed alpha
Helix 111
111
F
412 422Right-handed alpha
Helix 112
112
F
435 446Right-handed alpha
Helix 113
113
F
468 470Right-handed 310
Helix 114
114
F
478 484Right-handed 310
Helix 115
115
G
55 70Right-handed alpha
Helix 116
116
G
74 79Right-handed alpha
Helix 117
117
G
80 98Right-handed alpha
Helix 118
118
G
98 111Right-handed alpha
Helix 119
119
G
113 120Right-handed alpha
Helix 120
120
G
120 136Right-handed alpha
Helix 121
121
G
170 185Right-handed alpha
Helix 122
122
G
198 212Right-handed alpha
Helix 123
123
G
227 235Right-handed alpha
Helix 124
124
G
246 260Right-handed alpha
Helix 125
125
G
282 296Right-handed alpha
Helix 126
126
G
297 300Right-handed 310
Helix 127
127
G
312 329Right-handed alpha
Helix 128
128
G
346 363Right-handed alpha
Helix 129
129
G
393 398Right-handed alpha
Helix 130
130
G
412 422Right-handed alpha
Helix 131
131
G
435 446Right-handed alpha
Helix 132
132
G
468 470Right-handed 310
Helix 133
133
G
478 484Right-handed 310
Helix 134
134
H
55 70Right-handed alpha
Helix 135
135
H
74 79Right-handed alpha
Helix 136
136
H
80 98Right-handed alpha
Helix 137
137
H
98 111Right-handed alpha
Helix 138
138
H
113 120Right-handed alpha
Helix 139
139
H
120 136Right-handed alpha
Helix 140
140
H
170 185Right-handed alpha
Helix 141
141
H
198 212Right-handed alpha
Helix 142
142
H
227 234Right-handed alpha
Helix 143
143
H
246 260Right-handed alpha
Helix 144
144
H
282 296Right-handed alpha
Helix 145
145
H
297 300Right-handed 310
Helix 146
146
H
312 328Right-handed alpha
Helix 147
147
H
346 363Right-handed alpha
Helix 148
148
H
393 397Right-handed 310
Helix 149
149
H
412 422Right-handed alpha
Helix 150
150
H
435 446Right-handed alpha
Helix 151
151
H
468 470Right-handed 310
Helix 152
152
H
478 484Right-handed 310
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There are 28 sheets in PDB entry 1NZX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
22 24first strand
Strand 2
A
27 29anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
36 40first strand
Strand 2
A
47 52anti-parallel
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There are 20 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
366 369first strand
Strand 2
B
384 387anti-parallel
Strand 3
B
404 410parallel
Strand 4
B
307 311parallel
Strand 5
B
274 277parallel
Strand 6
B
428 432parallel
Strand 7
B
450 453parallel
Strand 8
A
486 494parallel
Strand 9
A
150 158anti-parallel
Strand 10
A
141 144anti-parallel
Strand 11
D
141 144anti-parallel
Strand 12
D
150 158anti-parallel
Strand 13
D
486 494anti-parallel
Strand 14
C
450 453parallel
Strand 15
C
428 432parallel
Strand 16
C
274 277parallel
Strand 17
C
307 311parallel
Strand 18
C
404 410parallel
Strand 19
C
384 387parallel
Strand 20
C
366 369anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
218 220first strand
Strand 2
A
188 192parallel
Strand 3
A
161 165parallel
Strand 4
A
240 244parallel
Strand 5
A
264 268parallel
Strand 6
A
472 473anti-parallel
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There are 20 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
366 369first strand
Strand 2
A
384 387anti-parallel
Strand 3
A
404 410parallel
Strand 4
A
307 311parallel
Strand 5
A
274 277parallel
Strand 6
A
428 432parallel
Strand 7
A
450 453parallel
Strand 8
B
486 494parallel
Strand 9
B
150 158anti-parallel
Strand 10
B
141 144anti-parallel
Strand 11
C
141 144anti-parallel
Strand 12
C
150 158anti-parallel
Strand 13
C
486 494anti-parallel
Strand 14
D
450 453parallel
Strand 15
D
428 432parallel
Strand 16
D
274 277parallel
Strand 17
D
307 311parallel
Strand 18
D
404 410parallel
Strand 19
D
384 387parallel
Strand 20
D
366 369anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
22 24first strand
Strand 2
B
27 29anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
36 40first strand
Strand 2
B
47 52anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
218 220first strand
Strand 2
B
188 192parallel
Strand 3
B
161 165parallel
Strand 4
B
240 244parallel
Strand 5
B
264 268parallel
Strand 6
B
472 473anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
22 24first strand
Strand 2
C
27 29anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
36 40first strand
Strand 2
C
47 52anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
218 220first strand
Strand 2
C
188 192parallel
Strand 3
C
161 165parallel
Strand 4
C
240 244parallel
Strand 5
C
264 268parallel
Strand 6
C
472 473anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
22 24first strand
Strand 2
D
27 29anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
36 40first strand
Strand 2
D
47 52anti-parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
218 220first strand
Strand 2
D
188 192parallel
Strand 3
D
161 165parallel
Strand 4
D
240 244parallel
Strand 5
D
264 268parallel
Strand 6
D
472 473anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
22 24first strand
Strand 2
E
27 29anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
36 40first strand
Strand 2
E
47 52anti-parallel
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There are 20 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
366 369first strand
Strand 2
F
384 387anti-parallel
Strand 3
F
404 410parallel
Strand 4
F
307 311parallel
Strand 5
F
274 277parallel
Strand 6
F
428 432parallel
Strand 7
F
450 453parallel
Strand 8
E
486 494parallel
Strand 9
E
150 158anti-parallel
Strand 10
E
141 144anti-parallel
Strand 11
H
141 144anti-parallel
Strand 12
H
150 158anti-parallel
Strand 13
H
486 494anti-parallel
Strand 14
G
450 453parallel
Strand 15
G
428 432parallel
Strand 16
G
274 277parallel
Strand 17
G
307 311parallel
Strand 18
G
404 410parallel
Strand 19
G
384 387parallel
Strand 20
G
366 369anti-parallel
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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
218 220first strand
Strand 2
E
188 192parallel
Strand 3
E
161 165parallel
Strand 4
E
240 244parallel
Strand 5
E
264 268parallel
Strand 6
E
472 473anti-parallel
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There are 20 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
366 369first strand
Strand 2
E
384 387anti-parallel
Strand 3
E
404 410parallel
Strand 4
E
307 311parallel
Strand 5
E
274 277parallel
Strand 6
E
428 432parallel
Strand 7
E
450 453parallel
Strand 8
F
486 494parallel
Strand 9
F
150 158anti-parallel
Strand 10
F
141 144anti-parallel
Strand 11
G
141 144anti-parallel
Strand 12
G
150 158anti-parallel
Strand 13
G
486 494anti-parallel
Strand 14
H
450 453parallel
Strand 15
H
428 432parallel
Strand 16
H
274 277parallel
Strand 17
H
307 311parallel
Strand 18
H
404 410parallel
Strand 19
H
384 387parallel
Strand 20
H
366 369anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
22 24first strand
Strand 2
F
27 29anti-parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
36 40first strand
Strand 2
F
47 52anti-parallel
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There are 6 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
218 220first strand
Strand 2
F
188 192parallel
Strand 3
F
161 165parallel
Strand 4
F
240 244parallel
Strand 5
F
264 268parallel
Strand 6
F
472 473anti-parallel
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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
22 24first strand
Strand 2
G
27 29anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
36 40first strand
Strand 2
G
47 52anti-parallel
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There are 6 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
218 220first strand
Strand 2
G
188 192parallel
Strand 3
G
161 165parallel
Strand 4
G
240 244parallel
Strand 5
G
264 268parallel
Strand 6
G
472 473anti-parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
22 24first strand
Strand 2
H
27 29anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
36 40first strand
Strand 2
H
47 52anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
218 220first strand
Strand 2
H
188 192parallel
Strand 3
H
161 165parallel
Strand 4
H
240 244parallel
Strand 5
H
264 268parallel
Strand 6
H
472 473anti-parallel
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