Analysis of interatomic Contacts of Structural Units in PDB entry:
1O0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1O0A entry

There is 1 chain in PDB entry 1O0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 5GLY 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1O0A. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
9 32Right-handed alpha
Helix 2
2
A
36 62Right-handed alpha
Helix 3
3
A
80 101Right-handed alpha
Helix 4
4
A
104 128Right-handed alpha
Helix 5
5
A
130 155Right-handed alpha
Helix 6
6
A
164 192Right-handed alpha
Helix 7
7
A
200 225Right-handed alpha
Helix 8
8
A
226 230Right-handed 310
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There is 1 sheet ( A) in PDB entry 1O0A.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
67 71first strand
Strand 2
A
74 78anti-parallel
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