Analysis of interatomic Contacts of Structural Units in PDB entry:
1OE6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OE6 entry

There are 5 chains in PDB entry 1OE6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 37THR 280
B
 GLU 36THR 280
E
 C 281 G 292
F
 C 293 T 298
F
 A 300 G 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 1OE6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 56Right-handed alpha
Helix 2
2
A
67 72Right-handed alpha
Helix 3
3
A
72 84Right-handed alpha
Helix 4
4
A
101 106Right-handed alpha
Helix 5
5
A
111 118Right-handed alpha
Helix 6
6
A
138 142Right-handed 310
Helix 7
7
A
146 161Right-handed alpha
Helix 8
8
A
162 168Right-handed alpha
Helix 9
9
A
194 217Right-handed alpha
Helix 10
10
A
225 239Right-handed alpha
Helix 11
11
A
261 273Right-handed alpha
Helix 12
12
B
38 55Right-handed alpha
Helix 13
13
B
67 72Right-handed alpha
Helix 14
14
B
72 84Right-handed alpha
Helix 15
15
B
101 106Right-handed alpha
Helix 16
16
B
111 118Right-handed alpha
Helix 17
17
B
138 142Right-handed 310
Helix 18
18
B
146 161Right-handed alpha
Helix 19
19
B
162 168Right-handed alpha
Helix 20
20
B
189 193Right-handed 310
Helix 21
21
B
196 217Right-handed alpha
Helix 22
22
B
225 238Right-handed alpha
Helix 23
23
B
257 273Right-handed alpha
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There are 4 sheets in PDB entry 1OE6. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 66first strand
Strand 2
A
179 181anti-parallel
Strand 3
A
187 188anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
90 94parallel
Strand 3
A
220 224parallel
Strand 4
A
244 248parallel
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There are 3 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 66first strand
Strand 2
B
179 181anti-parallel
Strand 3
B
187 188anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 174first strand
Strand 2
B
90 94parallel
Strand 3
B
220 224parallel
Strand 4
B
244 248parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il