Analysis of interatomic Contacts of Structural Units in PDB entry:
1OIZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OIZ entry

There are 2 chains in PDB entry 1OIZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 9SER 274
B
GLY 11GLU 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1OIZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
21 23Right-handed 310
Helix 3
3
A
24 38Right-handed alpha
Helix 4
4
A
48 59Right-handed alpha
Helix 5
5
A
62 80Right-handed alpha
Helix 6
6
A
80 85Right-handed alpha
Helix 7
7
A
88 91Right-handed 310
Helix 8
8
A
92 98Right-handed alpha
Helix 9
9
A
120 122Right-handed 310
Helix 10
10
A
128 144Right-handed alpha
Helix 11
11
A
146 153Right-handed alpha
Helix 12
12
A
164 169Right-handed alpha
Helix 13
13
A
172 185Right-handed alpha
Helix 14
14
A
200 211Right-handed alpha
Helix 15
15
A
218 220Right-handed 310
Helix 16
16
A
229 237Right-handed alpha
Helix 17
17
A
242 246Right-handed 310
Helix 18
18
A
251 266Right-handed alpha
Helix 19
19
A
266 272Right-handed alpha
Helix 20
20
B
11 16Right-handed alpha
Helix 21
21
B
21 23Right-handed 310
Helix 22
22
B
24 37Right-handed alpha
Helix 23
23
B
48 59Right-handed alpha
Helix 24
24
B
62 80Right-handed alpha
Helix 25
25
B
80 85Right-handed alpha
Helix 26
26
B
88 91Right-handed 310
Helix 27
27
B
92 99Right-handed alpha
Helix 28
28
B
120 122Right-handed 310
Helix 29
29
B
128 144Right-handed alpha
Helix 30
30
B
146 153Right-handed alpha
Helix 31
31
B
164 170Right-handed alpha
Helix 32
32
B
172 185Right-handed alpha
Helix 33
33
B
200 211Right-handed alpha
Helix 34
34
B
218 220Right-handed 310
Helix 35
35
B
229 237Right-handed alpha
Helix 36
36
B
242 246Right-handed 310
Helix 37
37
B
251 266Right-handed alpha
Helix 38
38
B
266 273Right-handed alpha
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There are 2 sheets in PDB entry 1OIZ. Click on sheet of interest to get list of strands forming it: AA, BA,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
101 103first strand
Strand 2
A
113 118anti-parallel
Strand 3
A
154 159parallel
Strand 4
A
191 197parallel
Strand 5
A
222 224parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
101 103first strand
Strand 2
B
113 118anti-parallel
Strand 3
B
154 159parallel
Strand 4
B
191 197parallel
Strand 5
B
222 224parallel
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