Analysis of interatomic Contacts of Structural Units in PDB entry:
1OVM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OVM entry

There are 4 chains in PDB entry 1OVM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 3ASN 551
B
THR 3ASN 551
C
THR 3ASN 551
D
THR 3ASN 551
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are110 helices in PDB entry 1OVM. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
6 18Right-handed alpha
Helix 2
2
A
28 30Right-handed 310
Helix 3
3
A
31 41Right-handed alpha
Helix 4
4
A
51 67Right-handed alpha
Helix 5
5
A
76 82Right-handed alpha
Helix 6
6
A
82 92Right-handed alpha
Helix 7
7
A
104 111Right-handed alpha
Helix 8
8
A
124 130Right-handed alpha
Helix 9
9
A
131 134Right-handed 310
Helix 10
10
A
144 160Right-handed alpha
Helix 11
11
A
169 174Right-handed alpha
Helix 12
12
A
191 208Right-handed alpha
Helix 13
13
A
217 223Right-handed alpha
Helix 14
14
A
225 236Right-handed alpha
Helix 15
15
A
244 247Right-handed 310
Helix 16
16
A
262 266Right-handed 310
Helix 17
17
A
267 276Right-handed alpha
Helix 18
18
A
323 337Right-handed alpha
Helix 19
19
A
361 373Right-handed alpha
Helix 20
20
A
384 391Right-handed alpha
Helix 21
21
A
411 424Right-handed alpha
Helix 22
22
A
435 442Right-handed alpha
Helix 23
23
A
443 451Right-handed alpha
Helix 24
24
A
465 472Right-handed alpha
Helix 25
25
A
476 480Right-handed 310
Helix 26
26
A
485 489Right-handed 310
Helix 27
27
A
506 518Right-handed alpha
Helix 28
28
A
536 551Right-handed alpha
Helix 29
29
B
6 18Right-handed alpha
Helix 30
30
B
28 30Right-handed 310
Helix 31
31
B
31 41Right-handed alpha
Helix 32
32
B
51 67Right-handed alpha
Helix 33
33
B
76 82Right-handed alpha
Helix 34
34
B
82 92Right-handed alpha
Helix 35
35
B
104 111Right-handed alpha
Helix 36
36
B
124 130Right-handed alpha
Helix 37
37
B
131 134Right-handed 310
Helix 38
38
B
144 160Right-handed alpha
Helix 39
39
B
169 173Right-handed alpha
Helix 40
40
B
191 208Right-handed alpha
Helix 41
41
B
217 223Right-handed alpha
Helix 42
42
B
225 236Right-handed alpha
Helix 43
43
B
262 266Right-handed 310
Helix 44
44
B
267 276Right-handed alpha
Helix 45
45
B
323 337Right-handed alpha
Helix 46
46
B
361 373Right-handed alpha
Helix 47
47
B
384 391Right-handed alpha
Helix 48
48
B
411 424Right-handed alpha
Helix 49
49
B
435 442Right-handed alpha
Helix 50
50
B
443 451Right-handed alpha
Helix 51
51
B
465 472Right-handed alpha
Helix 52
52
B
476 480Right-handed 310
Helix 53
53
B
485 493Right-handed 310
Helix 54
54
B
506 518Right-handed alpha
Helix 55
55
B
536 551Right-handed alpha
Helix 56
56
C
6 18Right-handed alpha
Helix 57
57
C
28 30Right-handed 310
Helix 58
58
C
31 41Right-handed alpha
Helix 59
59
C
51 67Right-handed alpha
Helix 60
60
C
76 82Right-handed alpha
Helix 61
61
C
82 92Right-handed alpha
Helix 62
62
C
104 111Right-handed alpha
Helix 63
63
C
124 130Right-handed alpha
Helix 64
64
C
131 134Right-handed 310
Helix 65
65
C
144 160Right-handed alpha
Helix 66
66
C
169 174Right-handed alpha
Helix 67
67
C
191 208Right-handed alpha
Helix 68
68
C
217 223Right-handed alpha
Helix 69
69
C
225 236Right-handed alpha
Helix 70
70
C
262 266Right-handed 310
Helix 71
71
C
267 276Right-handed alpha
Helix 72
72
C
323 338Right-handed alpha
Helix 73
73
C
361 373Right-handed alpha
Helix 74
74
C
384 391Right-handed alpha
Helix 75
75
C
411 424Right-handed alpha
Helix 76
76
C
435 441Right-handed alpha
Helix 77
77
C
443 451Right-handed alpha
Helix 78
78
C
465 472Right-handed alpha
Helix 79
79
C
476 480Right-handed 310
Helix 80
80
C
485 489Right-handed 310
Helix 81
81
C
506 518Right-handed alpha
Helix 82
82
C
536 551Right-handed alpha
Helix 83
83
D
6 19Right-handed alpha
Helix 84
84
D
28 30Right-handed 310
Helix 85
85
D
31 41Right-handed alpha
Helix 86
86
D
51 67Right-handed alpha
Helix 87
87
D
76 82Right-handed alpha
Helix 88
88
D
82 92Right-handed alpha
Helix 89
89
D
104 111Right-handed alpha
Helix 90
90
D
124 130Right-handed alpha
Helix 91
91
D
131 134Right-handed 310
Helix 92
92
D
144 160Right-handed alpha
Helix 93
93
D
169 174Right-handed alpha
Helix 94
94
D
191 208Right-handed alpha
Helix 95
95
D
217 223Right-handed alpha
Helix 96
96
D
225 236Right-handed alpha
Helix 97
97
D
244 247Right-handed 310
Helix 98
98
D
262 266Right-handed 310
Helix 99
99
D
267 276Right-handed alpha
Helix 100
100
D
323 337Right-handed alpha
Helix 101
101
D
361 373Right-handed alpha
Helix 102
102
D
384 391Right-handed alpha
Helix 103
103
D
411 424Right-handed alpha
Helix 104
104
D
435 442Right-handed alpha
Helix 105
105
D
444 451Right-handed alpha
Helix 106
106
D
465 472Right-handed alpha
Helix 107
107
D
476 480Right-handed 310
Helix 108
108
D
485 489Right-handed 310
Helix 109
109
D
506 518Right-handed alpha
Helix 110
110
D
536 551Right-handed alpha
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There are 12 sheets in PDB entry 1OVM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
45 48first strand
Strand 2
A
22 25parallel
Strand 3
A
69 74parallel
Strand 4
A
96 102parallel
Strand 5
A
163 168parallel
Strand 6
A
136 139parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
239 242first strand
Strand 2
A
212 216parallel
Strand 3
A
279 283parallel
Strand 4
A
304 307parallel
Strand 5
A
311 314anti-parallel
Strand 6
A
317 320anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
400 402first strand
Strand 2
A
378 381parallel
Strand 3
A
429 434parallel
Strand 4
A
456 461parallel
Strand 5
A
523 529parallel
Strand 6
A
499 504parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
45 48first strand
Strand 2
B
22 25parallel
Strand 3
B
69 74parallel
Strand 4
B
96 102parallel
Strand 5
B
163 168parallel
Strand 6
B
136 139parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
239 242first strand
Strand 2
B
212 216parallel
Strand 3
B
279 283parallel
Strand 4
B
304 307parallel
Strand 5
B
311 314anti-parallel
Strand 6
B
317 320anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
400 402first strand
Strand 2
B
378 381parallel
Strand 3
B
429 434parallel
Strand 4
B
456 461parallel
Strand 5
B
523 529parallel
Strand 6
B
499 504parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
45 48first strand
Strand 2
C
22 25parallel
Strand 3
C
69 74parallel
Strand 4
C
96 102parallel
Strand 5
C
163 168parallel
Strand 6
C
136 139parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
239 242first strand
Strand 2
C
212 216parallel
Strand 3
C
279 283parallel
Strand 4
C
304 307parallel
Strand 5
C
311 314anti-parallel
Strand 6
C
317 320anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
400 402first strand
Strand 2
C
378 381parallel
Strand 3
C
429 434parallel
Strand 4
C
456 461parallel
Strand 5
C
523 529parallel
Strand 6
C
499 504parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
45 48first strand
Strand 2
D
22 25parallel
Strand 3
D
69 74parallel
Strand 4
D
96 102parallel
Strand 5
D
163 168parallel
Strand 6
D
136 139parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
239 242first strand
Strand 2
D
212 216parallel
Strand 3
D
279 283parallel
Strand 4
D
304 308parallel
Strand 5
D
311 314anti-parallel
Strand 6
D
317 320anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
400 402first strand
Strand 2
D
378 381parallel
Strand 3
D
429 434parallel
Strand 4
D
456 461parallel
Strand 5
D
523 529parallel
Strand 6
D
499 504parallel
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