Analysis of interatomic Contacts of Structural Units in PDB entry:
1OX6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1OX6 entry

There are 2 chains in PDB entry 1OX6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -3ASP 550
B
 GLY -3ASP 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 1OX6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 23Right-handed alpha
Helix 2
2
A
34 36Right-handed 310
Helix 3
3
A
39 41Right-handed 310
Helix 4
4
A
53 62Right-handed alpha
Helix 5
5
A
65 75Right-handed alpha
Helix 6
6
A
83 89Right-handed 310
Helix 7
7
A
94 96Right-handed 310
Helix 8
8
A
155 163Right-handed alpha
Helix 9
9
A
194 196Right-handed 310
Helix 10
10
A
198 210Right-handed alpha
Helix 11
11
A
221 227Right-handed alpha
Helix 12
12
A
232 235Right-handed 310
Helix 13
13
A
277 288Right-handed alpha
Helix 14
14
A
307 309Right-handed 310
Helix 15
15
A
311 321Right-handed alpha
Helix 16
16
A
346 356Right-handed alpha
Helix 17
17
A
365 376Right-handed alpha
Helix 18
18
A
386 394Right-handed alpha
Helix 19
19
A
396 398Right-handed 310
Helix 20
20
A
413 415Right-handed 310
Helix 21
21
A
451 461Right-handed alpha
Helix 22
22
A
482 491Right-handed alpha
Helix 23
23
A
505 514Right-handed alpha
Helix 24
24
A
524 527Right-handed alpha
Helix 25
25
A
533 543Right-handed alpha
Helix 26
26
B
15 23Right-handed alpha
Helix 27
27
B
34 36Right-handed 310
Helix 28
28
B
39 41Right-handed 310
Helix 29
29
B
53 62Right-handed alpha
Helix 30
30
B
65 75Right-handed alpha
Helix 31
31
B
83 89Right-handed 310
Helix 32
32
B
94 96Right-handed 310
Helix 33
33
B
155 163Right-handed alpha
Helix 34
34
B
194 196Right-handed 310
Helix 35
35
B
198 209Right-handed alpha
Helix 36
36
B
221 227Right-handed alpha
Helix 37
37
B
232 235Right-handed 310
Helix 38
38
B
277 288Right-handed alpha
Helix 39
39
B
307 309Right-handed 310
Helix 40
40
B
311 321Right-handed alpha
Helix 41
41
B
346 356Right-handed alpha
Helix 42
42
B
365 376Right-handed alpha
Helix 43
43
B
386 394Right-handed alpha
Helix 44
44
B
396 398Right-handed 310
Helix 45
45
B
413 415Right-handed 310
Helix 46
46
B
451 461Right-handed alpha
Helix 47
47
B
482 491Right-handed alpha
Helix 48
48
B
505 514Right-handed alpha
Helix 49
49
B
524 527Right-handed alpha
Helix 50
50
B
533 543Right-handed alpha
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There are 8 sheets in PDB entry 1OX6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 31first strand
Strand 2
A
3 7parallel
Strand 3
A
45 49parallel
Strand 4
A
79 83parallel
Strand 5
A
187 190parallel
Strand 6
A
176 184anti-parallel
Strand 7
A
167 173anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 125first strand
Strand 2
A
143 147anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
519 522first strand
Strand 2
A
239 247parallel
Strand 3
A
293 299parallel
Strand 4
A
326 330parallel
Strand 5
A
360 363parallel
Strand 6
A
399 405parallel
Strand 7
A
465 470parallel
Strand 8
A
495 498parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 410first strand
Strand 2
A
433 438anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
28 31first strand
Strand 2
B
4 7parallel
Strand 3
B
45 49parallel
Strand 4
B
79 83parallel
Strand 5
B
187 190parallel
Strand 6
B
176 184anti-parallel
Strand 7
B
167 173anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 125first strand
Strand 2
B
143 147anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
520 522first strand
Strand 2
B
240 246parallel
Strand 3
B
293 298parallel
Strand 4
B
326 330parallel
Strand 5
B
360 363parallel
Strand 6
B
399 405parallel
Strand 7
B
465 470parallel
Strand 8
B
495 498parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 410first strand
Strand 2
B
433 438anti-parallel
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