Analysis of interatomic Contacts of Structural Units in PDB entry:
1P44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1P44 entry

There are 6 chains in PDB entry 1P44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2LEU 269
B
 THR 2LEU 269
C
 THR 2LEU 269
D
 THR 2LEU 269
E
 THR 2LEU 269
F
 THR 2LEU 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 76 helices in PDB entry 1P44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 32Right-handed alpha
Helix 2
2
A
43 52Right-handed alpha
Helix 3
3
A
67 83Right-handed alpha
Helix 4
4
A
112 124Right-handed alpha
Helix 5
5
A
124 135Right-handed alpha
Helix 6
6
A
158 180Right-handed alpha
Helix 7
7
A
196 201Right-handed alpha
Helix 8
8
A
202 205Right-handed 310
Helix 9
9
A
208 213Right-handed alpha
Helix 10
10
A
213 226Right-handed alpha
Helix 11
11
A
235 247Right-handed alpha
Helix 12
12
A
263 267Right-handed 310
Helix 13
13
B
20 32Right-handed alpha
Helix 14
14
B
43 48Right-handed alpha
Helix 15
15
B
50 54Right-handed 310
Helix 16
16
B
67 83Right-handed alpha
Helix 17
17
B
112 124Right-handed alpha
Helix 18
18
B
124 135Right-handed alpha
Helix 19
19
B
158 181Right-handed alpha
Helix 20
20
B
196 198Right-handed 310
Helix 21
21
B
199 204Right-handed alpha
Helix 22
22
B
208 221Right-handed alpha
Helix 23
23
B
221 226Right-handed alpha
Helix 24
24
B
235 247Right-handed alpha
Helix 25
25
C
20 30Right-handed alpha
Helix 26
26
C
43 52Right-handed alpha
Helix 27
27
C
67 83Right-handed alpha
Helix 28
28
C
99 103Right-handed 310
Helix 29
29
C
107 111Right-handed 310
Helix 30
30
C
112 124Right-handed alpha
Helix 31
31
C
124 135Right-handed alpha
Helix 32
32
C
158 181Right-handed alpha
Helix 33
33
C
196 202Right-handed alpha
Helix 34
34
C
210 215Right-handed alpha
Helix 35
35
C
215 226Right-handed alpha
Helix 36
36
C
235 246Right-handed alpha
Helix 37
37
D
20 32Right-handed alpha
Helix 38
38
D
47 52Right-handed alpha
Helix 39
39
D
67 78Right-handed alpha
Helix 40
40
D
78 83Right-handed alpha
Helix 41
41
D
99 103Right-handed 310
Helix 42
42
D
107 111Right-handed 310
Helix 43
43
D
112 124Right-handed alpha
Helix 44
44
D
125 135Right-handed alpha
Helix 45
45
D
158 179Right-handed alpha
Helix 46
46
D
180 183Right-handed 310
Helix 47
47
D
198 202Right-handed 310
Helix 48
48
D
216 226Right-handed alpha
Helix 49
49
D
235 247Right-handed alpha
Helix 50
50
D
263 267Right-handed 310
Helix 51
51
E
20 32Right-handed alpha
Helix 52
52
E
43 51Right-handed alpha
Helix 53
53
E
52 54Right-handed 310
Helix 54
54
E
67 79Right-handed alpha
Helix 55
55
E
112 124Right-handed alpha
Helix 56
56
E
124 135Right-handed alpha
Helix 57
57
E
158 182Right-handed alpha
Helix 58
58
E
196 204Right-handed alpha
Helix 59
59
E
209 226Right-handed alpha
Helix 60
60
E
235 245Right-handed alpha
Helix 61
61
E
263 267Right-handed 310
Helix 62
62
F
20 32Right-handed alpha
Helix 63
63
F
43 49Right-handed alpha
Helix 64
64
F
50 53Right-handed 310
Helix 65
65
F
67 72Right-handed alpha
Helix 66
66
F
73 83Right-handed alpha
Helix 67
67
F
99 103Right-handed 310
Helix 68
68
F
107 111Right-handed 310
Helix 69
69
F
112 124Right-handed alpha
Helix 70
70
F
125 135Right-handed alpha
Helix 71
71
F
159 181Right-handed alpha
Helix 72
72
F
197 201Right-handed 310
Helix 73
73
F
211 220Right-handed alpha
Helix 74
74
F
221 226Right-handed alpha
Helix 75
75
F
235 246Right-handed alpha
Helix 76
76
F
263 267Right-handed 310
Back to top of page

There are 6 sheets in PDB entry 1P44. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 62first strand
Strand 2
A
35 40parallel
Strand 3
A
9 13parallel
Strand 4
A
88 93parallel
Strand 5
A
138 148parallel
Strand 6
A
185 191parallel
Strand 7
A
256 260parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 62first strand
Strand 2
B
35 40parallel
Strand 3
B
9 13parallel
Strand 4
B
88 93parallel
Strand 5
B
138 148parallel
Strand 6
B
185 191parallel
Strand 7
B
256 260parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 38first strand
Strand 2
C
9 12parallel
Strand 3
C
88 93parallel
Strand 4
C
138 148parallel
Strand 5
C
185 191parallel
Strand 6
C
256 260parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 38first strand
Strand 2
D
8 12parallel
Strand 3
D
88 93parallel
Strand 4
D
138 148parallel
Strand 5
D
185 191parallel
Strand 6
D
257 260parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
60 62first strand
Strand 2
E
34 40parallel
Strand 3
E
8 13parallel
Strand 4
E
88 93parallel
Strand 5
E
138 148parallel
Strand 6
E
185 191parallel
Strand 7
E
256 260parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
60 62first strand
Strand 2
F
35 40parallel
Strand 3
F
9 13parallel
Strand 4
F
88 93parallel
Strand 5
F
138 148parallel
Strand 6
F
185 191parallel
Strand 7
F
256 260parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il