Analysis of interatomic Contacts of Structural Units in PDB entry:
1P7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1P7L entry

There are 4 chains in PDB entry 1P7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1LYS 383
B
ALA 1LYS 383
C
ALA 1LYS 383
D
ALA 1LYS 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 52 helices in PDB entry 1P7L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 34Right-handed alpha
Helix 2
2
A
63 76Right-handed alpha
Helix 3
3
A
80 83Right-handed 310
Helix 4
4
A
99 107Right-handed alpha
Helix 5
5
A
135 154Right-handed alpha
Helix 6
6
A
194 206Right-handed alpha
Helix 7
7
A
212 216Right-handed 310
Helix 8
8
A
233 238Right-handed alpha
Helix 9
9
A
269 288Right-handed alpha
Helix 10
10
A
321 333Right-handed alpha
Helix 11
11
A
336 345Right-handed alpha
Helix 12
12
A
351 356Right-handed 310
Helix 13
13
A
371 379Right-handed alpha
Helix 14
14
B
14 34Right-handed alpha
Helix 15
15
B
63 76Right-handed alpha
Helix 16
16
B
80 83Right-handed 310
Helix 17
17
B
99 107Right-handed alpha
Helix 18
18
B
135 154Right-handed alpha
Helix 19
19
B
194 206Right-handed alpha
Helix 20
20
B
212 216Right-handed 310
Helix 21
21
B
233 238Right-handed alpha
Helix 22
22
B
245 250Right-handed alpha
Helix 23
23
B
269 288Right-handed alpha
Helix 24
24
B
321 333Right-handed alpha
Helix 25
25
B
336 345Right-handed alpha
Helix 26
26
B
351 355Right-handed 310
Helix 27
27
B
371 379Right-handed alpha
Helix 28
28
C
14 34Right-handed alpha
Helix 29
29
C
63 76Right-handed alpha
Helix 30
30
C
80 83Right-handed 310
Helix 31
31
C
99 107Right-handed alpha
Helix 32
32
C
135 154Right-handed alpha
Helix 33
33
C
194 206Right-handed alpha
Helix 34
34
C
212 216Right-handed 310
Helix 35
35
C
233 238Right-handed alpha
Helix 36
36
C
269 288Right-handed alpha
Helix 37
37
C
321 333Right-handed alpha
Helix 38
38
C
336 345Right-handed alpha
Helix 39
39
C
351 356Right-handed 310
Helix 40
40
C
371 379Right-handed alpha
Helix 41
41
D
14 34Right-handed alpha
Helix 42
42
D
63 76Right-handed alpha
Helix 43
43
D
80 83Right-handed 310
Helix 44
44
D
99 107Right-handed alpha
Helix 45
45
D
135 154Right-handed alpha
Helix 46
46
D
194 206Right-handed alpha
Helix 47
47
D
233 238Right-handed alpha
Helix 48
48
D
269 288Right-handed alpha
Helix 49
49
D
321 333Right-handed alpha
Helix 50
50
D
336 345Right-handed alpha
Helix 51
51
D
351 355Right-handed 310
Helix 52
52
D
371 379Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 1P7L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
3 10first strand
Strand 2
A
160 173anti-parallel
Strand 3
A
176 189anti-parallel
Strand 4
A
221 224parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
90 96first strand
Strand 2
A
49 57parallel
Strand 3
A
38 46anti-parallel
Strand 4
A
240 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
78 79first strand
Strand 2
A
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
120 127first strand
Strand 2
A
293 300anti-parallel
Strand 3
A
309 313anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
3 10first strand
Strand 2
B
160 173anti-parallel
Strand 3
B
176 189anti-parallel
Strand 4
B
221 224parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
90 96first strand
Strand 2
B
49 57parallel
Strand 3
B
38 46anti-parallel
Strand 4
B
240 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
78 79first strand
Strand 2
B
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
120 127first strand
Strand 2
B
293 300anti-parallel
Strand 3
B
309 313anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 10first strand
Strand 2
C
160 173anti-parallel
Strand 3
C
176 189anti-parallel
Strand 4
C
221 224parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
90 96first strand
Strand 2
C
49 57parallel
Strand 3
C
38 46anti-parallel
Strand 4
C
240 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
78 79first strand
Strand 2
C
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
120 127first strand
Strand 2
C
293 300anti-parallel
Strand 3
C
309 313anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 10first strand
Strand 2
D
160 173anti-parallel
Strand 3
D
176 189anti-parallel
Strand 4
D
221 224parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
90 96first strand
Strand 2
D
49 57parallel
Strand 3
D
38 46anti-parallel
Strand 4
D
240 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
78 79first strand
Strand 2
D
84 85anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
120 127first strand
Strand 2
D
293 300anti-parallel
Strand 3
D
309 313anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il