Analysis of interatomic Contacts of Structural Units in PDB entry:
1PG0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PG0 entry

There is 1 chain in PDB entry 1PG0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 4VAL 550
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 1PG0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 41Right-handed alpha
Helix 2
2
A
55 65Right-handed alpha
Helix 3
3
A
68 87Right-handed alpha
Helix 4
4
A
99 116Right-handed alpha
Helix 5
5
A
194 196Right-handed 310
Helix 6
6
A
197 206Right-handed alpha
Helix 7
7
A
211 223Right-handed alpha
Helix 8
8
A
251 272Right-handed alpha
Helix 9
9
A
275 282Right-handed alpha
Helix 10
10
A
297 303Right-handed alpha
Helix 11
11
A
303 312Right-handed alpha
Helix 12
12
A
342 350Right-handed alpha
Helix 13
13
A
351 363Right-handed alpha
Helix 14
14
A
373 385Right-handed alpha
Helix 15
15
A
388 405Right-handed alpha
Helix 16
16
A
414 424Right-handed alpha
Helix 17
17
A
424 434Right-handed alpha
Helix 18
18
A
436 459Right-handed alpha
Helix 19
19
A
459 464Right-handed alpha
Helix 20
20
A
469 492Right-handed alpha
Helix 21
21
A
495 507Right-handed alpha
Helix 22
22
A
513 517Right-handed 310
Helix 23
23
A
535 550Right-handed alpha
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There are 4 sheets in PDB entry 1PG0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 96first strand
Strand 2
A
44 51parallel
Strand 3
A
6 11parallel
Strand 4
A
288 294parallel
Strand 5
A
319 323parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 125first strand
Strand 2
A
186 192anti-parallel
Strand 3
A
229 230anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 234first strand
Strand 2
A
248 250anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
370 372parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il