Analysis of interatomic Contacts of Structural Units in PDB entry:
1PGV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1PGV entry

There is 1 chain in PDB entry 1PGV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 222LYS 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1PGV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
223 233Right-handed alpha
Helix 2
2
A
250 262Right-handed alpha
Helix 3
3
A
278 283Right-handed alpha
Helix 4
4
A
284 292Right-handed alpha
Helix 5
5
A
306 317Right-handed alpha
Helix 6
6
A
337 351Right-handed alpha
Helix 7
7
A
363 386Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1PGV.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 242first strand
Strand 2
A
269 271parallel
Strand 3
A
297 299parallel
Strand 4
A
325 327parallel
Strand 5
A
356 358parallel
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