Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1PQR entry
There are 5 chains in PDB entry 1PQR
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
GLY 1 | TYR 6 |
A
|
ASN 8 | HIS 12 |
A
|
CYS 14 | ARG 20 |
A
|
TYR 23 | ARG 26 |
A
|
SER 28 | GLY 30 |
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There is 1
helix in PDB entry 1PQR. Click on helix number for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 21 |
26 | Right-handed alpha |
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There are no sheets in PDB entry
1PQR
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il