Analysis of interatomic Contacts of Structural Units in PDB entry:
1QM8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QM8 entry

There is 1 chain in PDB entry 1QM8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PHE 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1QM8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 32Right-handed alpha
Helix 2
2
A
36 62Right-handed alpha
Helix 3
3
A
80 102Right-handed alpha
Helix 4
4
A
104 128Right-handed alpha
Helix 5
5
A
130 132Right-handed 310
Helix 6
6
A
133 154Right-handed alpha
Helix 7
7
A
155 161Right-handed alpha
Helix 8
8
A
164 183Right-handed alpha
Helix 9
9
A
184 192Right-handed alpha
Helix 10
10
A
200 225Right-handed alpha
Helix 11
11
A
226 230Right-handed 310
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There is 1 sheet ( A) in PDB entry 1QM8.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 70first strand
Strand 2
A
75 79anti-parallel
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