Analysis of interatomic Contacts of Structural Units in PDB entry:
1QMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QMG entry

There are 4 chains in PDB entry 1QMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 82ALA 595
B
 PHE 86ALA 595
C
 THR 84ALA 595
D
 ALA 83ALA 595
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are117 helices in PDB entry 1QMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 116Right-handed 310
Helix 2
2
A
117 122Right-handed alpha
Helix 3
3
A
135 151Right-handed alpha
Helix 4
4
A
167 174Right-handed alpha
Helix 5
5
A
177 181Right-handed 310
Helix 6
6
A
186 192Right-handed alpha
Helix 7
7
A
201 209Right-handed alpha
Helix 8
8
A
208 216Right-handed alpha
Helix 9
9
A
227 236Right-handed alpha
Helix 10
10
A
254 266Right-handed alpha
Helix 11
11
A
286 298Right-handed alpha
Helix 12
12
A
307 321Right-handed alpha
Helix 13
13
A
324 341Right-handed alpha
Helix 14
14
A
344 351Right-handed alpha
Helix 15
15
A
352 358Right-handed alpha
Helix 16
16
A
358 367Right-handed alpha
Helix 17
17
A
368 375Right-handed alpha
Helix 18
18
A
377 409Right-handed alpha
Helix 19
19
A
409 421Right-handed alpha
Helix 20
20
A
439 451Right-handed alpha
Helix 21
21
A
461 483Right-handed alpha
Helix 22
22
A
485 494Right-handed alpha
Helix 23
23
A
494 500Right-handed alpha
Helix 24
24
A
501 509Right-handed alpha
Helix 25
25
A
508 515Right-handed alpha
Helix 26
26
A
518 539Right-handed alpha
Helix 27
27
A
539 546Right-handed alpha
Helix 28
28
A
551 561Right-handed alpha
Helix 29
29
A
562 572Right-handed alpha
Helix 30
30
A
589 593Right-handed 310
Helix 31
31
B
111 116Right-handed 310
Helix 32
32
B
117 122Right-handed alpha
Helix 33
33
B
135 151Right-handed alpha
Helix 34
34
B
166 174Right-handed alpha
Helix 35
35
B
186 193Right-handed alpha
Helix 36
36
B
201 209Right-handed alpha
Helix 37
37
B
208 215Right-handed alpha
Helix 38
38
B
227 236Right-handed alpha
Helix 39
39
B
254 265Right-handed alpha
Helix 40
40
B
286 299Right-handed alpha
Helix 41
41
B
307 321Right-handed alpha
Helix 42
42
B
324 341Right-handed alpha
Helix 43
43
B
344 351Right-handed alpha
Helix 44
44
B
352 358Right-handed alpha
Helix 45
45
B
358 367Right-handed alpha
Helix 46
46
B
368 375Right-handed alpha
Helix 47
47
B
377 409Right-handed alpha
Helix 48
48
B
409 421Right-handed alpha
Helix 49
49
B
439 451Right-handed alpha
Helix 50
50
B
461 482Right-handed alpha
Helix 51
51
B
485 494Right-handed alpha
Helix 52
52
B
494 500Right-handed alpha
Helix 53
53
B
501 509Right-handed alpha
Helix 54
54
B
509 515Right-handed alpha
Helix 55
55
B
518 539Right-handed alpha
Helix 56
56
B
539 546Right-handed alpha
Helix 57
57
B
551 561Right-handed alpha
Helix 58
58
B
562 573Right-handed alpha
Helix 59
59
B
589 593Right-handed 310
Helix 60
60
C
111 116Right-handed 310
Helix 61
61
C
117 122Right-handed alpha
Helix 62
62
C
136 151Right-handed alpha
Helix 63
63
C
166 174Right-handed alpha
Helix 64
64
C
186 193Right-handed alpha
Helix 65
65
C
201 209Right-handed alpha
Helix 66
66
C
208 216Right-handed alpha
Helix 67
67
C
227 236Right-handed alpha
Helix 68
68
C
254 265Right-handed alpha
Helix 69
69
C
286 298Right-handed alpha
Helix 70
70
C
307 321Right-handed alpha
Helix 71
71
C
324 341Right-handed alpha
Helix 72
72
C
344 351Right-handed alpha
Helix 73
73
C
352 358Right-handed alpha
Helix 74
74
C
358 367Right-handed alpha
Helix 75
75
C
368 375Right-handed alpha
Helix 76
76
C
377 409Right-handed alpha
Helix 77
77
C
409 421Right-handed alpha
Helix 78
78
C
439 451Right-handed alpha
Helix 79
79
C
461 482Right-handed alpha
Helix 80
80
C
485 494Right-handed alpha
Helix 81
81
C
494 500Right-handed alpha
Helix 82
82
C
501 509Right-handed alpha
Helix 83
83
C
509 515Right-handed alpha
Helix 84
84
C
518 539Right-handed alpha
Helix 85
85
C
539 546Right-handed alpha
Helix 86
86
C
551 561Right-handed alpha
Helix 87
87
C
562 573Right-handed alpha
Helix 88
88
C
589 593Right-handed 310
Helix 89
89
D
111 116Right-handed 310
Helix 90
90
D
117 122Right-handed alpha
Helix 91
91
D
135 151Right-handed alpha
Helix 92
92
D
166 174Right-handed alpha
Helix 93
93
D
186 193Right-handed alpha
Helix 94
94
D
201 209Right-handed alpha
Helix 95
95
D
208 216Right-handed alpha
Helix 96
96
D
227 236Right-handed alpha
Helix 97
97
D
254 266Right-handed alpha
Helix 98
98
D
286 298Right-handed alpha
Helix 99
99
D
307 321Right-handed alpha
Helix 100
100
D
324 342Right-handed alpha
Helix 101
101
D
344 351Right-handed alpha
Helix 102
102
D
352 358Right-handed alpha
Helix 103
103
D
358 367Right-handed alpha
Helix 104
104
D
368 375Right-handed alpha
Helix 105
105
D
377 409Right-handed alpha
Helix 106
106
D
409 421Right-handed alpha
Helix 107
107
D
439 451Right-handed alpha
Helix 108
108
D
461 482Right-handed alpha
Helix 109
109
D
485 494Right-handed alpha
Helix 110
110
D
494 500Right-handed alpha
Helix 111
111
D
501 509Right-handed alpha
Helix 112
112
D
509 515Right-handed alpha
Helix 113
113
D
518 539Right-handed alpha
Helix 114
114
D
539 546Right-handed alpha
Helix 115
115
D
551 561Right-handed alpha
Helix 116
116
D
562 572Right-handed alpha
Helix 117
117
D
589 593Right-handed 310
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There are 4 sheets in PDB entry 1QMG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 100first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
302 305anti-parallel
Strand 4
A
275 281parallel
Strand 5
A
245 251anti-parallel
Strand 6
A
221 224parallel
Strand 7
A
195 198parallel
Strand 8
A
127 131parallel
Strand 9
A
156 161parallel
Strand 10
A
183 185parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 100first strand
Strand 2
B
103 109anti-parallel
Strand 3
B
302 305anti-parallel
Strand 4
B
275 281parallel
Strand 5
B
245 251anti-parallel
Strand 6
B
221 224parallel
Strand 7
B
195 198parallel
Strand 8
B
127 131parallel
Strand 9
B
156 161parallel
Strand 10
B
183 185parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 100first strand
Strand 2
C
103 109anti-parallel
Strand 3
C
302 305anti-parallel
Strand 4
C
275 281parallel
Strand 5
C
245 251anti-parallel
Strand 6
C
221 224parallel
Strand 7
C
195 198parallel
Strand 8
C
127 131parallel
Strand 9
C
156 161parallel
Strand 10
C
183 185parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
96 100first strand
Strand 2
D
103 109anti-parallel
Strand 3
D
302 305anti-parallel
Strand 4
D
275 281parallel
Strand 5
D
245 251anti-parallel
Strand 6
D
221 224parallel
Strand 7
D
195 198parallel
Strand 8
D
127 131parallel
Strand 9
D
156 161parallel
Strand 10
D
183 185parallel
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