Analysis of interatomic Contacts of Structural Units in PDB entry:
1QZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1QZZ entry

There is 1 chain in PDB entry 1QZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 10SER 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1QZZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
27 39Right-handed alpha
Helix 3
3
A
40 47Right-handed alpha
Helix 4
4
A
51 60Right-handed alpha
Helix 5
5
A
62 76Right-handed alpha
Helix 6
6
A
94 99Right-handed 310
Helix 7
7
A
105 111Right-handed alpha
Helix 8
8
A
114 121Right-handed alpha
Helix 9
9
A
122 124Right-handed 310
Helix 10
10
A
125 133Right-handed alpha
Helix 11
11
A
136 142Right-handed alpha
Helix 12
12
A
144 152Right-handed alpha
Helix 13
13
A
152 162Right-handed alpha
Helix 14
14
A
163 167Right-handed 310
Helix 15
15
A
171 177Right-handed alpha
Helix 16
16
A
194 204Right-handed alpha
Helix 17
17
A
214 228Right-handed alpha
Helix 18
18
A
257 261Right-handed 310
Helix 19
19
A
262 276Right-handed alpha
Helix 20
20
A
296 313Right-handed alpha
Helix 21
21
A
318 328Right-handed alpha
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There are 2 sheets in PDB entry 1QZZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
79 80first strand
Strand 2
A
90 91anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
234 238first strand
Strand 2
A
208 213parallel
Strand 3
A
185 189parallel
Strand 4
A
249 255parallel
Strand 5
A
277 287parallel
Strand 6
A
348 355anti-parallel
Strand 7
A
331 339anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il