Analysis of interatomic Contacts of Structural Units in PDB entry:
1R0D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1R0D entry

There are 8 chains in PDB entry 1R0D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 773MSE 966
B
 ASP 773ASP 962
D
 ASP 773ASP 962
E
 ASP 773ASP 962
F
 ASP 773ASP 962
G
 ASP 773ASP 962
H
 ASP 773ASP 962
I
 ASP 773MSE 966
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 57 helices in PDB entry 1R0D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
775 777Right-handed 310
Helix 2
2
A
778 812Right-handed alpha
Helix 3
3
A
813 853Right-handed alpha
Helix 4
4
A
857 865Right-handed alpha
Helix 5
5
A
865 896Right-handed alpha
Helix 6
6
A
899 923Right-handed alpha
Helix 7
7
A
931 965Right-handed alpha
Helix 8
8
B
775 777Right-handed 310
Helix 9
9
B
778 810Right-handed alpha
Helix 10
10
B
813 853Right-handed alpha
Helix 11
11
B
857 865Right-handed alpha
Helix 12
12
B
865 896Right-handed alpha
Helix 13
13
B
899 923Right-handed alpha
Helix 14
14
B
931 962Right-handed alpha
Helix 15
15
D
775 777Right-handed 310
Helix 16
16
D
778 809Right-handed alpha
Helix 17
17
D
814 853Right-handed alpha
Helix 18
18
D
857 865Right-handed alpha
Helix 19
19
D
865 896Right-handed alpha
Helix 20
20
D
899 923Right-handed alpha
Helix 21
21
D
931 962Right-handed alpha
Helix 22
22
E
775 777Right-handed 310
Helix 23
23
E
778 810Right-handed alpha
Helix 24
24
E
813 853Right-handed alpha
Helix 25
25
E
857 865Right-handed alpha
Helix 26
26
E
865 896Right-handed alpha
Helix 27
27
E
899 923Right-handed alpha
Helix 28
28
E
931 962Right-handed alpha
Helix 29
29
F
775 777Right-handed 310
Helix 30
30
F
778 812Right-handed alpha
Helix 31
31
F
813 851Right-handed alpha
Helix 32
32
F
857 865Right-handed alpha
Helix 33
33
F
865 896Right-handed alpha
Helix 34
34
F
899 923Right-handed alpha
Helix 35
35
F
931 961Right-handed alpha
Helix 36
36
G
775 777Right-handed 310
Helix 37
37
G
778 812Right-handed alpha
Helix 38
38
G
813 853Right-handed alpha
Helix 39
39
G
857 865Right-handed alpha
Helix 40
40
G
865 896Right-handed alpha
Helix 41
41
G
899 922Right-handed alpha
Helix 42
42
G
923 925Right-handed 310
Helix 43
43
G
931 962Right-handed alpha
Helix 44
44
H
775 777Right-handed 310
Helix 45
45
H
778 809Right-handed alpha
Helix 46
46
H
813 853Right-handed alpha
Helix 47
47
H
857 865Right-handed alpha
Helix 48
48
H
865 896Right-handed alpha
Helix 49
49
H
899 923Right-handed alpha
Helix 50
50
H
931 961Right-handed alpha
Helix 51
51
I
775 777Right-handed 310
Helix 52
52
I
778 812Right-handed alpha
Helix 53
53
I
813 854Right-handed alpha
Helix 54
54
I
857 865Right-handed alpha
Helix 55
55
I
865 896Right-handed alpha
Helix 56
56
I
899 923Right-handed alpha
Helix 57
57
I
931 966Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1R0D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il