Analysis of interatomic Contacts of Structural Units in PDB entry:
1RBO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1RBO entry

There are 8 chains in PDB entry 1RBO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 ALA 9VAL 475
S
 MET 1TYR 123
B
 ALA 9VAL 475
C
 MET 1TYR 123
E
 ALA 9VAL 475
F
 MET 1TYR 123
H
 ALA 9VAL 475
I
 MET 1TYR 123
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 1RBO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
L
20 24Right-handed 310
Helix 2
2
L
50 60Right-handed alpha
Helix 3
3
L
70 74Right-handed 310
Helix 4
4
L
77 80Right-handed alpha
Helix 5
5
L
105 107Right-handed 310
Helix 6
6
L
113 121Right-handed alpha
Helix 7
7
L
124 126Right-handed 310
Helix 8
8
L
142 147Right-handed alpha
Helix 9
9
L
155 162Right-handed alpha
Helix 10
10
L
182 195Right-handed alpha
Helix 11
11
L
214 232Right-handed alpha
Helix 12
12
L
247 260Right-handed alpha
Helix 13
13
L
269 272Right-handed alpha
Helix 14
14
L
274 287Right-handed alpha
Helix 15
15
L
298 302Right-handed alpha
Helix 16
16
L
311 321Right-handed alpha
Helix 17
17
L
339 350Right-handed alpha
Helix 18
18
L
358 360Right-handed 310
Helix 19
19
L
384 394Right-handed 310
Helix 20
20
L
404 407Right-handed alpha
Helix 21
21
L
413 432Right-handed alpha
Helix 22
22
L
437 450Right-handed alpha
Helix 23
23
L
453 462Right-handed alpha
Helix 24
24
S
23 35Right-handed alpha
Helix 25
25
S
80 93Right-handed alpha
Helix 26
26
B
20 24Right-handed 310
Helix 27
27
B
50 60Right-handed alpha
Helix 28
28
B
70 74Right-handed 310
Helix 29
29
B
77 80Right-handed alpha
Helix 30
30
B
105 107Right-handed 310
Helix 31
31
B
113 121Right-handed alpha
Helix 32
32
B
124 126Right-handed 310
Helix 33
33
B
142 147Right-handed alpha
Helix 34
34
B
155 162Right-handed alpha
Helix 35
35
B
182 195Right-handed alpha
Helix 36
36
B
214 232Right-handed alpha
Helix 37
37
B
247 260Right-handed alpha
Helix 38
38
B
269 272Right-handed alpha
Helix 39
39
B
274 287Right-handed alpha
Helix 40
40
B
298 302Right-handed alpha
Helix 41
41
B
311 321Right-handed alpha
Helix 42
42
B
339 350Right-handed alpha
Helix 43
43
B
358 360Right-handed 310
Helix 44
44
B
384 394Right-handed 310
Helix 45
45
B
404 407Right-handed alpha
Helix 46
46
B
413 432Right-handed alpha
Helix 47
47
B
437 450Right-handed alpha
Helix 48
48
B
453 462Right-handed alpha
Helix 49
49
C
23 35Right-handed alpha
Helix 50
50
C
80 93Right-handed alpha
Helix 51
51
E
20 24Right-handed 310
Helix 52
52
E
50 60Right-handed alpha
Helix 53
53
E
70 74Right-handed 310
Helix 54
54
E
77 80Right-handed alpha
Helix 55
55
E
105 107Right-handed 310
Helix 56
56
E
113 121Right-handed alpha
Helix 57
57
E
124 126Right-handed 310
Helix 58
58
E
142 147Right-handed alpha
Helix 59
59
E
155 162Right-handed alpha
Helix 60
60
E
182 195Right-handed alpha
Helix 61
61
E
214 232Right-handed alpha
Helix 62
62
E
247 260Right-handed alpha
Helix 63
63
E
269 272Right-handed alpha
Helix 64
64
E
274 287Right-handed alpha
Helix 65
65
E
298 302Right-handed alpha
Helix 66
66
E
311 321Right-handed alpha
Helix 67
67
E
339 350Right-handed alpha
Helix 68
68
E
358 360Right-handed 310
Helix 69
69
E
384 394Right-handed 310
Helix 70
70
E
404 407Right-handed alpha
Helix 71
71
E
413 432Right-handed alpha
Helix 72
72
E
437 450Right-handed alpha
Helix 73
73
E
453 462Right-handed alpha
Helix 74
74
F
23 35Right-handed alpha
Helix 75
75
F
80 93Right-handed alpha
Helix 76
76
H
20 24Right-handed 310
Helix 77
77
H
50 60Right-handed alpha
Helix 78
78
H
70 74Right-handed 310
Helix 79
79
H
77 80Right-handed alpha
Helix 80
80
H
105 107Right-handed 310
Helix 81
81
H
113 121Right-handed alpha
Helix 82
82
H
124 126Right-handed 310
Helix 83
83
H
142 147Right-handed alpha
Helix 84
84
H
155 162Right-handed alpha
Helix 85
85
H
182 195Right-handed alpha
Helix 86
86
H
214 232Right-handed alpha
Helix 87
87
H
247 260Right-handed alpha
Helix 88
88
H
269 272Right-handed alpha
Helix 89
89
H
274 287Right-handed alpha
Helix 90
90
H
298 302Right-handed alpha
Helix 91
91
H
311 321Right-handed alpha
Helix 92
92
H
339 350Right-handed alpha
Helix 93
93
H
358 360Right-handed 310
Helix 94
94
H
384 394Right-handed 310
Helix 95
95
H
404 407Right-handed alpha
Helix 96
96
H
413 432Right-handed alpha
Helix 97
97
H
437 450Right-handed alpha
Helix 98
98
H
453 462Right-handed alpha
Helix 99
99
I
23 35Right-handed alpha
Helix 100
100
I
80 93Right-handed alpha
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There are 20 sheets in PDB entry 1RBO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
132 139first strand
Strand 2
L
36 43anti-parallel
Strand 3
L
97 103anti-parallel
Strand 4
L
83 89anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
169 171first strand
Strand 2
L
398 401parallel
Strand 3
L
375 379parallel
Strand 4
L
325 327parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
199 201first strand
Strand 2
L
237 239parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
264 268first strand
Strand 2
L
290 294parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
68 70first strand
Strand 2
S
39 45anti-parallel
Strand 3
S
98 104anti-parallel
Strand 4
S
113 118anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 139first strand
Strand 2
B
36 43anti-parallel
Strand 3
B
97 103anti-parallel
Strand 4
B
83 89anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 171first strand
Strand 2
B
398 401parallel
Strand 3
B
375 379parallel
Strand 4
B
325 327parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 201first strand
Strand 2
B
237 239parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
264 268first strand
Strand 2
B
290 294parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 70first strand
Strand 2
C
39 45anti-parallel
Strand 3
C
98 104anti-parallel
Strand 4
C
113 118anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
132 139first strand
Strand 2
E
36 43anti-parallel
Strand 3
E
97 103anti-parallel
Strand 4
E
83 89anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
169 171first strand
Strand 2
E
398 401parallel
Strand 3
E
375 379parallel
Strand 4
E
325 327parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
199 201first strand
Strand 2
E
237 239parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
264 268first strand
Strand 2
E
290 294parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
68 70first strand
Strand 2
F
39 45anti-parallel
Strand 3
F
98 104anti-parallel
Strand 4
F
113 118anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
132 139first strand
Strand 2
H
36 43anti-parallel
Strand 3
H
97 103anti-parallel
Strand 4
H
83 89anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
169 171first strand
Strand 2
H
398 401parallel
Strand 3
H
375 379parallel
Strand 4
H
325 327parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
199 201first strand
Strand 2
H
237 239parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
264 268first strand
Strand 2
H
290 294parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
68 70first strand
Strand 2
I
39 45anti-parallel
Strand 3
I
98 104anti-parallel
Strand 4
I
113 118anti-parallel
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