Analysis of interatomic Contacts of Structural Units in PDB entry:
1S0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1S0Q entry

There is 1 chain in PDB entry 1S0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 660ASN 882
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 3 helices in PDB entry 1S0Q. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
697 701Right-handed 310
Helix 2
2
A
803 811Right-handed alpha
Helix 3
3
A
871 881Right-handed alpha
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There are 2 sheets in PDB entry 1S0Q. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
664 665first strand
Strand 2
A
795 800anti-parallel
Strand 3
A
774 779anti-parallel
Strand 4
A
839 842anti-parallel
Strand 5
A
845 852anti-parallel
Strand 6
A
863 867anti-parallel
Strand 7
A
819 822anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
674 678first strand
Strand 2
A
682 690anti-parallel
Strand 3
A
693 696anti-parallel
Strand 4
A
745 749anti-parallel
Strand 5
A
722 731anti-parallel
Strand 6
A
706 709anti-parallel
Strand 7
A
674 678anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il