Analysis of interatomic Contacts of Structural Units in PDB entry:
1S0V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1S0V entry

There are 16 chains in PDB entry 1S0V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	G 2	C 18
F	G 1	U 8
G	G 1	C 9
H	G 2	C 18
I	G 1	U 8
J	G 1	C 9
K	G 2	C 18
L	G 1	U 8
M	G 1	C 9
N	G 2	C 18
O	G 1	U 8
P	G 1	C 9
A	ASN 2	ALA 883
B	ASN 2	ALA 883
C	ASN 2	ALA 883
D	ASN 2	ALA 883

There are159 helices in PDB entry 1S0V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	8	13	Right-handed alpha
Helix 2	2	A	21	29	Right-handed alpha
Helix 3	3	A	29	60	Right-handed alpha
Helix 4	4	A	76	92	Right-handed alpha
Helix 5	5	A	100	106	Right-handed alpha
Helix 6	6	A	110	127	Right-handed alpha
Helix 7	7	A	133	152	Right-handed alpha
Helix 8	8	A	163	173	Right-handed alpha
Helix 9	9	A	175	191	Right-handed alpha
Helix 10	10	A	205	224	Right-handed alpha
Helix 11	11	A	247	262	Right-handed alpha
Helix 12	12	A	301	307	Right-handed alpha
Helix 13	13	A	313	326	Right-handed alpha
Helix 14	14	A	331	342	Right-handed alpha
Helix 15	15	A	343	345	Right-handed 310
Helix 16	16	A	373	408	Right-handed alpha
Helix 17	17	A	437	442	Right-handed alpha
Helix 18	18	A	452	467	Right-handed alpha
Helix 19	19	A	474	485	Right-handed alpha
Helix 20	20	A	485	495	Right-handed alpha
Helix 21	21	A	496	499	Right-handed 310
Helix 22	22	A	507	525	Right-handed alpha
Helix 23	23	A	526	528	Right-handed 310
Helix 24	24	A	540	549	Right-handed alpha
Helix 25	25	A	552	560	Right-handed alpha
Helix 26	26	A	569	588	Right-handed alpha
Helix 27	27	A	612	624	Right-handed alpha
Helix 28	28	A	626	637	Right-handed alpha
Helix 29	29	A	642	654	Right-handed alpha
Helix 30	30	A	654	660	Right-handed alpha
Helix 31	31	A	669	686	Right-handed alpha
Helix 32	32	A	689	708	Right-handed alpha
Helix 33	33	A	770	777	Right-handed alpha
Helix 34	34	A	777	801	Right-handed alpha
Helix 35	35	A	817	839	Right-handed alpha
Helix 36	36	A	840	850	Right-handed alpha
Helix 37	37	A	851	853	Right-handed 310
Helix 38	38	A	854	858	Right-handed 310
Helix 39	39	A	871	878	Right-handed 310
Helix 40	40	B	10	14	Right-handed 310
Helix 41	41	B	21	29	Right-handed alpha
Helix 42	42	B	29	61	Right-handed alpha
Helix 43	43	B	62	69	Right-handed 310
Helix 44	44	B	70	78	Right-handed alpha
Helix 45	45	B	78	94	Right-handed alpha
Helix 46	46	B	100	106	Right-handed alpha
Helix 47	47	B	110	127	Right-handed alpha
Helix 48	48	B	133	157	Right-handed alpha
Helix 49	49	B	161	165	Right-handed 310
Helix 50	50	B	166	173	Right-handed alpha
Helix 51	51	B	177	193	Right-handed alpha
Helix 52	52	B	205	222	Right-handed alpha
Helix 53	53	B	247	262	Right-handed alpha
Helix 54	54	B	301	307	Right-handed alpha
Helix 55	55	B	313	325	Right-handed alpha
Helix 56	56	B	331	345	Right-handed alpha
Helix 57	57	B	373	409	Right-handed alpha
Helix 58	58	B	437	444	Right-handed alpha
Helix 59	59	B	453	469	Right-handed alpha
Helix 60	60	B	474	495	Right-handed alpha
Helix 61	61	B	496	499	Right-handed 310
Helix 62	62	B	500	505	Right-handed alpha
Helix 63	63	B	507	525	Right-handed alpha
Helix 64	64	B	540	550	Right-handed alpha
Helix 65	65	B	552	557	Right-handed alpha
Helix 66	66	B	569	586	Right-handed alpha
Helix 67	67	B	612	624	Right-handed alpha
Helix 68	68	B	626	637	Right-handed alpha
Helix 69	69	B	638	640	Right-handed 310
Helix 70	70	B	642	654	Right-handed alpha
Helix 71	71	B	654	660	Right-handed alpha
Helix 72	72	B	669	686	Right-handed alpha
Helix 73	73	B	689	708	Right-handed alpha
Helix 74	74	B	770	777	Right-handed alpha
Helix 75	75	B	777	802	Right-handed alpha
Helix 76	76	B	817	839	Right-handed alpha
Helix 77	77	B	840	851	Right-handed alpha
Helix 78	78	B	852	853	Right-handed 310
Helix 79	79	B	854	858	Right-handed 310
Helix 80	80	B	871	878	Right-handed 310
Helix 81	81	C	10	14	Right-handed 310
Helix 82	82	C	21	29	Right-handed alpha
Helix 83	83	C	30	60	Right-handed alpha
Helix 84	84	C	62	67	Right-handed 310
Helix 85	85	C	70	91	Right-handed alpha
Helix 86	86	C	100	106	Right-handed alpha
Helix 87	87	C	110	127	Right-handed alpha
Helix 88	88	C	133	151	Right-handed alpha
Helix 89	89	C	163	173	Right-handed alpha
Helix 90	90	C	175	191	Right-handed alpha
Helix 91	91	C	205	224	Right-handed alpha
Helix 92	92	C	247	263	Right-handed alpha
Helix 93	93	C	301	307	Right-handed alpha
Helix 94	94	C	313	326	Right-handed alpha
Helix 95	95	C	331	345	Right-handed alpha
Helix 96	96	C	373	378	Right-handed alpha
Helix 97	97	C	378	408	Right-handed alpha
Helix 98	98	C	437	443	Right-handed alpha
Helix 99	99	C	452	467	Right-handed alpha
Helix 100	100	C	474	485	Right-handed alpha
Helix 101	101	C	485	495	Right-handed alpha
Helix 102	102	C	501	505	Right-handed 310
Helix 103	103	C	507	512	Right-handed alpha
Helix 104	104	C	512	523	Right-handed alpha
Helix 105	105	C	524	527	Right-handed 310
Helix 106	106	C	540	549	Right-handed alpha
Helix 107	107	C	552	559	Right-handed alpha
Helix 108	108	C	569	588	Right-handed alpha
Helix 109	109	C	612	624	Right-handed alpha
Helix 110	110	C	626	635	Right-handed alpha
Helix 111	111	C	636	640	Right-handed 310
Helix 112	112	C	642	654	Right-handed alpha
Helix 113	113	C	654	661	Right-handed alpha
Helix 114	114	C	669	686	Right-handed alpha
Helix 115	115	C	689	708	Right-handed alpha
Helix 116	116	C	772	777	Right-handed alpha
Helix 117	117	C	777	801	Right-handed alpha
Helix 118	118	C	817	839	Right-handed alpha
Helix 119	119	C	840	851	Right-handed alpha
Helix 120	120	C	852	853	Right-handed 310
Helix 121	121	C	854	858	Right-handed 310
Helix 122	122	C	871	878	Right-handed 310
Helix 123	123	D	8	13	Right-handed alpha
Helix 124	124	D	21	29	Right-handed alpha
Helix 125	125	D	29	61	Right-handed alpha
Helix 126	126	D	70	94	Right-handed alpha
Helix 127	127	D	100	107	Right-handed alpha
Helix 128	128	D	110	127	Right-handed alpha
Helix 129	129	D	133	151	Right-handed alpha
Helix 130	130	D	151	157	Right-handed alpha
Helix 131	131	D	163	173	Right-handed alpha
Helix 132	132	D	175	191	Right-handed alpha
Helix 133	133	D	205	224	Right-handed alpha
Helix 134	134	D	247	263	Right-handed alpha
Helix 135	135	D	301	307	Right-handed alpha
Helix 136	136	D	313	324	Right-handed alpha
Helix 137	137	D	331	342	Right-handed alpha
Helix 138	138	D	373	408	Right-handed alpha
Helix 139	139	D	452	468	Right-handed alpha
Helix 140	140	D	474	485	Right-handed alpha
Helix 141	141	D	485	495	Right-handed alpha
Helix 142	142	D	496	505	Right-handed 310
Helix 143	143	D	507	525	Right-handed alpha
Helix 144	144	D	540	550	Right-handed alpha
Helix 145	145	D	552	559	Right-handed alpha
Helix 146	146	D	569	588	Right-handed alpha
Helix 147	147	D	612	624	Right-handed alpha
Helix 148	148	D	626	636	Right-handed alpha
Helix 149	149	D	637	640	Right-handed 310
Helix 150	150	D	642	654	Right-handed alpha
Helix 151	151	D	654	660	Right-handed alpha
Helix 152	152	D	669	686	Right-handed alpha
Helix 153	153	D	689	708	Right-handed alpha
Helix 154	154	D	770	801	Right-handed alpha
Helix 155	155	D	817	839	Right-handed alpha
Helix 156	156	D	842	851	Right-handed alpha
Helix 157	157	D	852	853	Right-handed 310
Helix 158	158	D	854	858	Right-handed 310
Helix 159	159	D	871	878	Right-handed 310

There are 29 sheets in PDB entry 1S0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	232	first strand
Strand 2	A	241	246	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	294	295	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	414	415	first strand
Strand 2	A	327	330	anti-parallel
Strand 3	A	444	446	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	418	420	first strand
Strand 2	A	426	428	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	534	537	first strand
Strand 2	A	813	816	anti-parallel
Strand 3	A	807	809	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	594	596	first strand
Strand 2	A	607	609	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	725	728	first strand
Strand 2	A	734	737	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	740	742	first strand
Strand 2	A	767	769	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	230	first strand
Strand 2	B	243	246	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	450	451	first strand
Strand 2	B	529	530	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	534	537	first strand
Strand 2	B	813	816	anti-parallel
Strand 3	B	808	809	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	595	598	first strand
Strand 2	B	605	608	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	725	728	first strand
Strand 2	B	734	737	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	740	742	first strand
Strand 2	B	767	769	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	228	first strand
Strand 2	C	245	246	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	231	232	first strand
Strand 2	C	241	242	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	328	330	first strand
Strand 2	C	444	446	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	450	451	first strand
Strand 2	C	529	530	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	537	first strand
Strand 2	C	813	816	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	594	598	first strand
Strand 2	C	605	609	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	725	728	first strand
Strand 2	C	734	737	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	740	742	first strand
Strand 2	C	767	769	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	227	228	first strand
Strand 2	D	245	246	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	328	330	first strand
Strand 2	D	444	446	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	450	451	first strand
Strand 2	D	529	530	anti-parallel

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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	534	537	first strand
Strand 2	D	813	816	anti-parallel
Strand 3	D	808	809	anti-parallel

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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	593	598	first strand
Strand 2	D	605	610	anti-parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	725	728	first strand
Strand 2	D	734	737	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	740	742	first strand
Strand 2	D	767	769	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1S0V

Analysis of interatomic Contacts of Structural Units in PDB entry:
1S0V