Analysis of interatomic Contacts of Structural Units in PDB entry:
1S6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1S6L entry

There is 1 chain in PDB entry 1S6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 21PRO 212
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1S6L. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
25 33Right-handed alpha
Helix 2
2
A
38 47Right-handed alpha
Helix 3
3
A
49 58Right-handed alpha
Helix 4
4
A
103 108Right-handed alpha
Helix 5
5
A
167 177Right-handed alpha
Helix 6
6
A
189 205Right-handed alpha
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There are 3 sheets in PDB entry 1S6L. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
65 66first strand
Strand 2
A
70 71anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
90 94first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
111 116anti-parallel
Strand 4
A
123 128anti-parallel
Strand 5
A
133 137anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
163 165first strand
Strand 2
A
142 145anti-parallel
Strand 3
A
185 188anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il