Analysis of interatomic Contacts of Structural Units in PDB entry:
1T2B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T2B entry

There are 2 chains in PDB entry 1T2B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8GLU 404
B
 THR 8GLU 404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 1T2B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed 310
Helix 2
2
A
27 39Right-handed alpha
Helix 3
3
A
47 51Right-handed 310
Helix 4
4
A
57 67Right-handed alpha
Helix 5
5
A
73 76Right-handed 310
Helix 6
6
A
96 104Right-handed alpha
Helix 7
7
A
105 109Right-handed 310
Helix 8
8
A
110 115Right-handed alpha
Helix 9
9
A
117 134Right-handed alpha
Helix 10
10
A
140 144Right-handed alpha
Helix 11
11
A
146 158Right-handed alpha
Helix 12
12
A
160 162Right-handed 310
Helix 13
13
A
163 176Right-handed alpha
Helix 14
14
A
179 204Right-handed alpha
Helix 15
15
A
208 215Right-handed alpha
Helix 16
16
A
224 241Right-handed alpha
Helix 17
17
A
241 257Right-handed alpha
Helix 18
18
A
257 267Right-handed alpha
Helix 19
19
A
270 283Right-handed alpha
Helix 20
20
A
311 316Right-handed alpha
Helix 21
21
A
342 346Right-handed 310
Helix 22
22
A
349 368Right-handed alpha
Helix 23
23
B
27 39Right-handed alpha
Helix 24
24
B
47 51Right-handed 310
Helix 25
25
B
57 67Right-handed alpha
Helix 26
26
B
73 76Right-handed 310
Helix 27
27
B
96 106Right-handed alpha
Helix 28
28
B
107 109Right-handed 310
Helix 29
29
B
110 116Right-handed alpha
Helix 30
30
B
117 134Right-handed alpha
Helix 31
31
B
140 144Right-handed alpha
Helix 32
32
B
146 158Right-handed alpha
Helix 33
33
B
160 162Right-handed 310
Helix 34
34
B
163 176Right-handed alpha
Helix 35
35
B
179 204Right-handed alpha
Helix 36
36
B
208 216Right-handed alpha
Helix 37
37
B
224 241Right-handed alpha
Helix 38
38
B
241 257Right-handed alpha
Helix 39
39
B
257 267Right-handed alpha
Helix 40
40
B
270 283Right-handed alpha
Helix 41
41
B
311 316Right-handed alpha
Helix 42
42
B
342 346Right-handed 310
Helix 43
43
B
349 368Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 1T2B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
52 55anti-parallel
Strand 3
A
307 310parallel
Strand 4
A
287 291anti-parallel
Strand 5
A
71 72anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 139first strand
Strand 2
A
393 395anti-parallel
Strand 3
A
372 373anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 297first strand
Strand 2
A
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 382first strand
Strand 2
A
388 391anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 46first strand
Strand 2
B
52 55anti-parallel
Strand 3
B
307 310parallel
Strand 4
B
287 291anti-parallel
Strand 5
B
71 72anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 139first strand
Strand 2
B
393 395anti-parallel
Strand 3
B
372 373anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
295 297first strand
Strand 2
B
300 302anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 382first strand
Strand 2
B
388 391anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il