Analysis of interatomic Contacts of Structural Units in PDB entry:
1T46


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T46 entry

There is 1 chain in PDB entry 1T46 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 565ASN 933
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1T46. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
579 583Right-handed 310
Helix 2
2
A
585 587Right-handed 310
Helix 3
3
A
630 648Right-handed alpha
Helix 4
4
A
678 685Right-handed alpha
Helix 5
5
A
765 786Right-handed alpha
Helix 6
6
A
794 796Right-handed 310
Helix 7
7
A
811 815Right-handed 310
Helix 8
8
A
832 836Right-handed 310
Helix 9
9
A
837 844Right-handed alpha
Helix 10
10
A
847 864Right-handed alpha
Helix 11
11
A
876 886Right-handed alpha
Helix 12
12
A
896 907Right-handed alpha
Helix 13
13
A
910 914Right-handed 310
Helix 14
14
A
916 931Right-handed alpha
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There are 3 sheets in PDB entry 1T46. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
589 597first strand
Strand 2
A
601 609anti-parallel
Strand 3
A
617 625anti-parallel
Strand 4
A
667 671anti-parallel
Strand 5
A
656 660anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
676 677first strand
Strand 2
A
798 801anti-parallel
Strand 3
A
805 808anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 825first strand
Strand 2
A
830 831anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il