Analysis of interatomic Contacts of Structural Units in PDB entry:
1T4G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T4G entry

There is 1 chain in PDB entry 1T4G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 5ASP 322
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1T4G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 22Right-handed alpha
Helix 2
2
A
26 32Right-handed alpha
Helix 3
3
A
34 40Right-handed alpha
Helix 4
4
A
45 60Right-handed alpha
Helix 5
5
A
67 75Right-handed alpha
Helix 6
6
A
84 91Right-handed alpha
Helix 7
7
A
110 122Right-handed alpha
Helix 8
8
A
123 126Right-handed 310
Helix 9
9
A
136 141Right-handed 310
Helix 10
10
A
155 166Right-handed alpha
Helix 11
11
A
169 176Right-handed alpha
Helix 12
12
A
184 194Right-handed alpha
Helix 13
13
A
194 201Right-handed alpha
Helix 14
14
A
214 221Right-handed alpha
Helix 15
15
A
226 248Right-handed alpha
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There are 2 sheets in PDB entry 1T4G. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
79 80anti-parallel
Strand 3
A
128 129anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 181first strand
Strand 2
A
143 149parallel
Strand 3
A
204 211parallel
Strand 4
A
251 257parallel
Strand 5
A
100 105parallel
Strand 6
A
284 290parallel
Strand 7
A
295 302anti-parallel
Strand 8
A
309 316anti-parallel
Strand 9
A
319 321anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il