Analysis of interatomic Contacts of Structural Units in PDB entry:
1T5A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1T5A entry

There are 4 chains in PDB entry 1T5A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ILE 13PRO 531
B
ILE 13PRO 531
C
ILE 13PRO 531
D
ILE 13PRO 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 1T5A. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
17 22Right-handed alpha
Helix 2
2
A
25 32Right-handed alpha
Helix 3
3
A
57 68Right-handed alpha
Helix 4
4
A
80 97Right-handed alpha
Helix 5
5
A
145 149Right-handed 310
Helix 6
6
A
162 167Right-handed 310
Helix 7
7
A
222 235Right-handed alpha
Helix 8
8
A
247 259Right-handed alpha
Helix 9
9
A
260 263Right-handed 310
Helix 10
10
A
273 279Right-handed alpha
Helix 11
11
A
279 287Right-handed alpha
Helix 12
12
A
294 301Right-handed alpha
Helix 13
13
A
302 304Right-handed 310
Helix 14
14
A
305 321Right-handed alpha
Helix 15
15
A
331 336Right-handed 310
Helix 16
16
A
341 355Right-handed alpha
Helix 17
17
A
362 367Right-handed alpha
Helix 18
18
A
370 389Right-handed alpha
Helix 19
19
A
390 402Right-handed alpha
Helix 20
20
A
407 424Right-handed alpha
Helix 21
21
A
435 444Right-handed alpha
Helix 22
22
A
456 463Right-handed alpha
Helix 23
23
A
464 466Right-handed 310
Helix 24
24
A
481 500Right-handed alpha
Helix 25
25
B
17 22Right-handed alpha
Helix 26
26
B
25 32Right-handed alpha
Helix 27
27
B
57 68Right-handed alpha
Helix 28
28
B
80 97Right-handed alpha
Helix 29
29
B
145 149Right-handed 310
Helix 30
30
B
162 167Right-handed 310
Helix 31
31
B
222 235Right-handed alpha
Helix 32
32
B
247 259Right-handed alpha
Helix 33
33
B
260 263Right-handed 310
Helix 34
34
B
273 279Right-handed alpha
Helix 35
35
B
279 287Right-handed alpha
Helix 36
36
B
294 301Right-handed alpha
Helix 37
37
B
302 304Right-handed 310
Helix 38
38
B
305 321Right-handed alpha
Helix 39
39
B
331 336Right-handed 310
Helix 40
40
B
341 355Right-handed alpha
Helix 41
41
B
362 367Right-handed alpha
Helix 42
42
B
370 389Right-handed alpha
Helix 43
43
B
390 402Right-handed alpha
Helix 44
44
B
407 424Right-handed alpha
Helix 45
45
B
435 443Right-handed alpha
Helix 46
46
B
456 463Right-handed alpha
Helix 47
47
B
464 466Right-handed 310
Helix 48
48
B
481 500Right-handed alpha
Helix 49
49
C
17 22Right-handed alpha
Helix 50
50
C
25 33Right-handed alpha
Helix 51
51
C
57 68Right-handed alpha
Helix 52
52
C
80 97Right-handed alpha
Helix 53
53
C
145 149Right-handed 310
Helix 54
54
C
162 167Right-handed 310
Helix 55
55
C
222 235Right-handed alpha
Helix 56
56
C
247 259Right-handed alpha
Helix 57
57
C
260 263Right-handed 310
Helix 58
58
C
273 279Right-handed alpha
Helix 59
59
C
279 287Right-handed alpha
Helix 60
60
C
294 301Right-handed alpha
Helix 61
61
C
302 304Right-handed 310
Helix 62
62
C
305 321Right-handed alpha
Helix 63
63
C
331 336Right-handed 310
Helix 64
64
C
341 355Right-handed alpha
Helix 65
65
C
362 367Right-handed alpha
Helix 66
66
C
370 389Right-handed alpha
Helix 67
67
C
390 402Right-handed alpha
Helix 68
68
C
407 424Right-handed alpha
Helix 69
69
C
435 443Right-handed alpha
Helix 70
70
C
456 463Right-handed alpha
Helix 71
71
C
464 466Right-handed 310
Helix 72
72
C
481 500Right-handed alpha
Helix 73
73
D
17 22Right-handed alpha
Helix 74
74
D
25 33Right-handed alpha
Helix 75
75
D
57 68Right-handed alpha
Helix 76
76
D
80 97Right-handed alpha
Helix 77
77
D
145 149Right-handed 310
Helix 78
78
D
162 167Right-handed 310
Helix 79
79
D
222 235Right-handed alpha
Helix 80
80
D
247 259Right-handed alpha
Helix 81
81
D
260 263Right-handed 310
Helix 82
82
D
273 279Right-handed alpha
Helix 83
83
D
279 287Right-handed alpha
Helix 84
84
D
294 301Right-handed alpha
Helix 85
85
D
302 304Right-handed 310
Helix 86
86
D
305 321Right-handed alpha
Helix 87
87
D
331 336Right-handed 310
Helix 88
88
D
341 355Right-handed alpha
Helix 89
89
D
362 367Right-handed alpha
Helix 90
90
D
370 389Right-handed alpha
Helix 91
91
D
390 402Right-handed alpha
Helix 92
92
D
407 424Right-handed alpha
Helix 93
93
D
435 443Right-handed alpha
Helix 94
94
D
456 463Right-handed alpha
Helix 95
95
D
464 466Right-handed 310
Helix 96
96
D
481 500Right-handed alpha
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There are 14 sheets in PDB entry 1T5A. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
46 50first strand
Strand 2
A
71 75parallel
Strand 3
A
109 113parallel
Strand 4
A
239 242parallel
Strand 5
A
266 271parallel
Strand 6
A
289 293parallel
Strand 7
A
324 327parallel
Strand 8
A
358 361parallel
Strand 9
A
46 50parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
119 120first strand
Strand 2
A
208 210anti-parallel
Strand 3
A
173 176anti-parallel
Strand 4
A
181 188anti-parallel
Strand 5
A
192 199anti-parallel
Strand 6
A
139 143anti-parallel
Strand 7
A
156 158parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
132 134first strand
Strand 2
A
201 203anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
469 473first strand
Strand 2
A
450 454parallel
Strand 3
A
428 431parallel
Strand 4
A
508 514parallel
Strand 5
A
522 529anti-parallel
Strand 6
B
522 529anti-parallel
Strand 7
B
508 514anti-parallel
Strand 8
B
428 431parallel
Strand 9
B
450 454parallel
Strand 10
B
469 473parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
46 50first strand
Strand 2
B
71 75parallel
Strand 3
B
109 113parallel
Strand 4
B
239 242parallel
Strand 5
B
266 271parallel
Strand 6
B
289 293parallel
Strand 7
B
324 327parallel
Strand 8
B
358 361parallel
Strand 9
B
46 50parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
119 120first strand
Strand 2
B
208 210anti-parallel
Strand 3
B
173 176anti-parallel
Strand 4
B
181 188anti-parallel
Strand 5
B
192 199anti-parallel
Strand 6
B
139 143anti-parallel
Strand 7
B
156 158parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
132 134first strand
Strand 2
B
201 203anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
46 50first strand
Strand 2
C
71 75parallel
Strand 3
C
109 113parallel
Strand 4
C
239 242parallel
Strand 5
C
266 271parallel
Strand 6
C
289 293parallel
Strand 7
C
324 327parallel
Strand 8
C
358 361parallel
Strand 9
C
46 50parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
119 120first strand
Strand 2
C
208 210anti-parallel
Strand 3
C
173 176anti-parallel
Strand 4
C
181 188anti-parallel
Strand 5
C
192 199anti-parallel
Strand 6
C
139 143anti-parallel
Strand 7
C
156 158parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
132 134first strand
Strand 2
C
201 203anti-parallel
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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
469 473first strand
Strand 2
C
450 454parallel
Strand 3
C
428 431parallel
Strand 4
C
508 514parallel
Strand 5
C
522 529anti-parallel
Strand 6
D
522 529anti-parallel
Strand 7
D
508 514anti-parallel
Strand 8
D
428 431parallel
Strand 9
D
450 454parallel
Strand 10
D
469 473parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
46 50first strand
Strand 2
D
71 75parallel
Strand 3
D
109 113parallel
Strand 4
D
239 242parallel
Strand 5
D
266 271parallel
Strand 6
D
289 293parallel
Strand 7
D
324 327parallel
Strand 8
D
358 361parallel
Strand 9
D
46 50parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
132 134first strand
Strand 2
D
201 203anti-parallel
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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
156 158first strand
Strand 2
D
139 143parallel
Strand 3
D
192 199anti-parallel
Strand 4
D
181 188anti-parallel
Strand 5
D
173 176anti-parallel
Strand 6
D
209 210anti-parallel
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