Analysis of interatomic Contacts of Structural Units in PDB entry:
1TAU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TAU entry

There are 3 chains in PDB entry 1TAU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
T
G 901 G 908
P
C 958 C 951
A
PRO 10GLU 832
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 1TAU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
19 28Right-handed alpha
Helix 2
2
A
42 57Right-handed alpha
Helix 3
3
A
92 105Right-handed alpha
Helix 4
4
A
118 131Right-handed alpha
Helix 5
5
A
143 147Right-handed 310
Helix 6
6
A
165 171Right-handed alpha
Helix 7
7
A
176 184Right-handed 310
Helix 8
8
A
208 211Right-handed 310
Helix 9
9
A
230 233Right-handed alpha
Helix 10
10
A
238 246Right-handed 310
Helix 11
11
A
266 275Right-handed alpha
Helix 12
12
A
278 286Right-handed 310
Helix 13
13
A
316 318Right-handed 310
Helix 14
14
A
338 343Right-handed alpha
Helix 15
15
A
353 362Right-handed alpha
Helix 16
16
A
373 380Right-handed alpha
Helix 17
17
A
387 393Right-handed alpha
Helix 18
18
A
402 420Right-handed alpha
Helix 19
19
A
424 432Right-handed alpha
Helix 20
20
A
434 447Right-handed alpha
Helix 21
21
A
453 478Right-handed alpha
Helix 22
22
A
487 494Right-handed alpha
Helix 23
23
A
517 520Right-handed alpha
Helix 24
24
A
527 544Right-handed alpha
Helix 25
25
A
548 551Right-handed alpha
Helix 26
26
A
581 583Right-handed 310
Helix 27
27
A
589 597Right-handed alpha
Helix 28
28
A
614 623Right-handed alpha
Helix 29
29
A
626 634Right-handed alpha
Helix 30
30
A
638 647Right-handed alpha
Helix 31
31
A
651 653Right-handed 310
Helix 32
32
A
656 671Right-handed alpha
Helix 33
33
A
676 682Right-handed alpha
Helix 34
34
A
689 699Right-handed alpha
Helix 35
35
A
701 717Right-handed alpha
Helix 36
36
A
731 734Right-handed 310
Helix 37
37
A
738 774Right-handed alpha
Helix 38
38
A
795 808Right-handed alpha
Helix 39
39
A
827 830Right-handed alpha
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There are 5 sheets in PDB entry 1TAU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
109 111first strand
Strand 2
A
61 65parallel
Strand 3
A
13 18parallel
Strand 4
A
135 139parallel
Strand 5
A
153 156parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
331 334first strand
Strand 2
A
321 328anti-parallel
Strand 3
A
306 311anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
563 565first strand
Strand 2
A
575 577anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
819 824first strand
Strand 2
A
604 611anti-parallel
Strand 3
A
786 792anti-parallel
Strand 4
A
778 783anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
719 721first strand
Strand 2
A
727 729anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il