Analysis of interatomic Contacts of Structural Units in PDB entry:
1TGZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TGZ entry

There are 2 chains in PDB entry 1TGZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 366LEU 589
B
 GLU 20GLY 97
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1TGZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
369 381Right-handed alpha
Helix 2
2
A
399 404Right-handed alpha
Helix 3
3
A
413 431Right-handed alpha
Helix 4
4
A
441 455Right-handed alpha
Helix 5
5
A
456 459Right-handed 310
Helix 6
6
A
462 466Right-handed 310
Helix 7
7
A
501 520Right-handed alpha
Helix 8
8
A
525 529Right-handed 310
Helix 9
9
A
547 560Right-handed alpha
Helix 10
10
A
568 570Right-handed 310
Helix 11
11
A
571 585Right-handed alpha
Helix 12
12
B
44 54Right-handed alpha
Helix 13
13
B
58 60Right-handed 310
Helix 14
14
B
76 81Right-handed alpha
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There are 4 sheets in PDB entry 1TGZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
388 392first strand
Strand 2
A
395 398anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
411 412first strand
Strand 2
B
95 96anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 437first strand
Strand 2
A
468 475parallel
Strand 3
A
478 485anti-parallel
Strand 4
A
490 494anti-parallel
Strand 5
A
530 533parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 38first strand
Strand 2
B
22 28anti-parallel
Strand 3
B
87 92parallel
Strand 4
B
62 66anti-parallel
Strand 5
B
69 70anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il