Analysis of interatomic Contacts of Structural Units in PDB entry:
1TLP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TLP entry

There is 1 chain in PDB entry 1TLP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ILE 1LYS 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1TLP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
E
65 87Right-handed alpha
Helix 2
H2
E
133 135Right-handed 310
Helix 3
H3
E
137 150Right-handed alpha
Helix 4
H4
E
160 180Right-handed alpha
Helix 5
H5
E
190 192Right-handed alpha
Helix 6
H6
E
208 211Right-handed 310
Helix 7
H7
E
217 219Right-handed 310
Helix 8
H8
E
226 229Left-handed alpha
Helix 9
H9
E
233 246Right-handed alpha
Helix 10
H10
E
260 274Right-handed alpha
Helix 11
H11
E
281 296Right-handed alpha
Helix 12
H12
E
301 313Right-handed alpha
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There are 3 sheets in PDB entry 1TLP. Click on sheet of interest to get list of strands forming it: S1, S2, S3,

There are 5 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
31 32first strand
Strand 2
E
39 43anti-parallel
Strand 3
E
100 106parallel
Strand 4
E
119 122parallel
Strand 5
E
112 115anti-parallel
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There are 5 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
52 54first strand
Strand 2
E
39 43anti-parallel
Strand 3
E
100 106parallel
Strand 4
E
119 122parallel
Strand 5
E
112 115anti-parallel
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There are 5 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
55 57first strand
Strand 2
E
27 29anti-parallel
Strand 3
E
16 25anti-parallel
Strand 4
E
2 11anti-parallel
Strand 5
E
61 62parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il