Analysis of interatomic Contacts of Structural Units in PDB entry:
1TZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TZ6 entry

There are 2 chains in PDB entry 1TZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 5SER 308
B
 ASN 5SER 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1TZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 43Right-handed alpha
Helix 2
2
A
56 69Right-handed alpha
Helix 3
3
A
106 111Right-handed 310
Helix 4
4
A
112 116Right-handed 310
Helix 5
5
A
130 133Right-handed 310
Helix 6
6
A
134 151Right-handed alpha
Helix 7
7
A
162 166Right-handed 310
Helix 8
8
A
170 183Right-handed alpha
Helix 9
9
A
190 197Right-handed alpha
Helix 10
10
A
201 206Right-handed 310
Helix 11
11
A
209 213Right-handed 310
Helix 12
12
A
249 263Right-handed alpha
Helix 13
13
A
269 288Right-handed alpha
Helix 14
14
A
299 308Right-handed alpha
Helix 15
15
B
31 42Right-handed alpha
Helix 16
16
B
56 69Right-handed alpha
Helix 17
17
B
106 111Right-handed 310
Helix 18
18
B
112 116Right-handed 310
Helix 19
19
B
130 133Right-handed 310
Helix 20
20
B
134 151Right-handed alpha
Helix 21
21
B
162 166Right-handed 310
Helix 22
22
B
170 183Right-handed alpha
Helix 23
23
B
190 198Right-handed alpha
Helix 24
24
B
201 205Right-handed 310
Helix 25
25
B
207 212Right-handed alpha
Helix 26
26
B
222 224Right-handed 310
Helix 27
27
B
249 263Right-handed alpha
Helix 28
28
B
269 290Right-handed alpha
Helix 29
29
B
293 297Right-handed 310
Helix 30
30
B
299 308Right-handed alpha
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There are 3 sheets in PDB entry 1TZ6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 79first strand
Strand 2
A
47 54parallel
Strand 3
A
7 10parallel
Strand 4
A
124 128parallel
Strand 5
A
154 158parallel
Strand 6
A
185 189parallel
Strand 7
A
217 221parallel
Strand 8
A
225 230anti-parallel
Strand 9
A
233 238anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
86 88anti-parallel
Strand 3
A
14 19parallel
Strand 4
A
24 30anti-parallel
Strand 5
B
24 30anti-parallel
Strand 6
B
14 19anti-parallel
Strand 7
B
85 88parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 79first strand
Strand 2
B
47 54parallel
Strand 3
B
7 11parallel
Strand 4
B
124 128parallel
Strand 5
B
154 158parallel
Strand 6
B
185 189parallel
Strand 7
B
216 220parallel
Strand 8
B
226 230anti-parallel
Strand 9
B
233 237anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il