Analysis of interatomic Contacts of Structural Units in PDB entry:
1U0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U0W entry

There are 4 chains in PDB entry 1U0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ILE 389
B
 VAL 2ILE 389
C
 VAL 2ILE 389
D
 VAL 2ILE 389
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 68 helices in PDB entry 1U0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 12Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
49 63Right-handed alpha
Helix 4
4
A
73 80Right-handed alpha
Helix 5
5
A
90 118Right-handed alpha
Helix 6
6
A
120 124Right-handed 310
Helix 7
7
A
139 149Right-handed alpha
Helix 8
8
A
165 180Right-handed alpha
Helix 9
9
A
205 215Right-handed alpha
Helix 10
10
A
270 288Right-handed alpha
Helix 11
11
A
289 291Right-handed 310
Helix 12
12
A
306 318Right-handed alpha
Helix 13
13
A
324 335Right-handed alpha
Helix 14
14
A
337 339Right-handed 310
Helix 15
15
A
340 356Right-handed alpha
Helix 16
16
B
3 12Right-handed alpha
Helix 17
17
B
35 44Right-handed alpha
Helix 18
18
B
49 62Right-handed alpha
Helix 19
19
B
73 80Right-handed alpha
Helix 20
20
B
80 85Right-handed alpha
Helix 21
21
B
90 118Right-handed alpha
Helix 22
22
B
120 124Right-handed 310
Helix 23
23
B
139 149Right-handed alpha
Helix 24
24
B
165 181Right-handed alpha
Helix 25
25
B
193 197Right-handed 310
Helix 26
26
B
205 210Right-handed alpha
Helix 27
27
B
210 215Right-handed alpha
Helix 28
28
B
270 288Right-handed alpha
Helix 29
29
B
289 291Right-handed 310
Helix 30
30
B
306 318Right-handed alpha
Helix 31
31
B
324 335Right-handed alpha
Helix 32
32
B
337 339Right-handed 310
Helix 33
33
B
340 356Right-handed alpha
Helix 34
34
C
3 12Right-handed alpha
Helix 35
35
C
35 44Right-handed alpha
Helix 36
36
C
49 63Right-handed alpha
Helix 37
37
C
73 79Right-handed alpha
Helix 38
38
C
80 85Right-handed alpha
Helix 39
39
C
90 118Right-handed alpha
Helix 40
40
C
120 124Right-handed 310
Helix 41
41
C
139 149Right-handed alpha
Helix 42
42
C
165 180Right-handed alpha
Helix 43
43
C
193 197Right-handed 310
Helix 44
44
C
205 215Right-handed alpha
Helix 45
45
C
270 288Right-handed alpha
Helix 46
46
C
289 291Right-handed 310
Helix 47
47
C
306 318Right-handed alpha
Helix 48
48
C
324 335Right-handed alpha
Helix 49
49
C
337 339Right-handed 310
Helix 50
50
C
340 356Right-handed alpha
Helix 51
51
D
3 12Right-handed alpha
Helix 52
52
D
35 44Right-handed alpha
Helix 53
53
D
49 63Right-handed alpha
Helix 54
54
D
73 80Right-handed alpha
Helix 55
55
D
80 85Right-handed alpha
Helix 56
56
D
90 118Right-handed alpha
Helix 57
57
D
120 124Right-handed 310
Helix 58
58
D
139 149Right-handed alpha
Helix 59
59
D
165 180Right-handed alpha
Helix 60
60
D
193 197Right-handed 310
Helix 61
61
D
205 210Right-handed alpha
Helix 62
62
D
210 215Right-handed alpha
Helix 63
63
D
270 288Right-handed alpha
Helix 64
64
D
289 291Right-handed 310
Helix 65
65
D
306 318Right-handed alpha
Helix 66
66
D
324 335Right-handed alpha
Helix 67
67
D
337 339Right-handed 310
Helix 68
68
D
340 356Right-handed alpha
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There are 13 sheets in PDB entry 1U0W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 160first strand
Strand 2
A
126 131parallel
Strand 3
A
185 192parallel
Strand 4
A
218 225anti-parallel
Strand 5
A
18 25anti-parallel
Strand 6
A
237 246anti-parallel
Strand 7
A
378 386anti-parallel
Strand 8
A
367 374anti-parallel
Strand 9
A
299 302parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
67 69anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
B
254 259anti-parallel
Strand 3
B
262 267anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
254 259anti-parallel
Strand 3
A
266 267anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
254 259anti-parallel
Strand 3
B
136 137anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 160first strand
Strand 2
B
126 131parallel
Strand 3
B
185 192parallel
Strand 4
B
218 225anti-parallel
Strand 5
B
18 25anti-parallel
Strand 6
B
237 246anti-parallel
Strand 7
B
378 385anti-parallel
Strand 8
B
367 374anti-parallel
Strand 9
B
299 302parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 32first strand
Strand 2
B
67 69anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 160first strand
Strand 2
C
126 131parallel
Strand 3
C
185 192parallel
Strand 4
C
218 225anti-parallel
Strand 5
C
18 25anti-parallel
Strand 6
C
237 246anti-parallel
Strand 7
C
378 385anti-parallel
Strand 8
C
367 374anti-parallel
Strand 9
C
299 302parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 32first strand
Strand 2
C
67 69anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
136 137first strand
Strand 2
D
254 259anti-parallel
Strand 3
D
262 267anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
262 266first strand
Strand 2
C
255 259anti-parallel
Strand 3
D
136 137anti-parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
155 160first strand
Strand 2
D
126 131parallel
Strand 3
D
185 192parallel
Strand 4
D
218 225anti-parallel
Strand 5
D
18 25anti-parallel
Strand 6
D
237 246anti-parallel
Strand 7
D
378 386anti-parallel
Strand 8
D
367 374anti-parallel
Strand 9
D
299 302parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 32first strand
Strand 2
D
67 69anti-parallel
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