Analysis of interatomic Contacts of Structural Units in PDB entry:
1U59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U59 entry

There is 1 chain in PDB entry 1U59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 328HIS 612
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1U59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
333 335Right-handed 310
Helix 2
2
A
376 393Right-handed alpha
Helix 3
3
A
422 427Right-handed alpha
Helix 4
4
A
434 455Right-handed alpha
Helix 5
5
A
463 465Right-handed 310
Helix 6
6
A
502 506Right-handed 310
Helix 7
7
A
507 514Right-handed alpha
Helix 8
8
A
517 534Right-handed alpha
Helix 9
9
A
545 554Right-handed alpha
Helix 10
10
A
565 575Right-handed alpha
Helix 11
11
A
579 583Right-handed 310
Helix 12
12
A
585 602Right-handed alpha
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There are 4 sheets in PDB entry 1U59. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 345first strand
Strand 2
A
350 357anti-parallel
Strand 3
A
364 371anti-parallel
Strand 4
A
410 415anti-parallel
Strand 5
A
401 406anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
420 421first strand
Strand 2
A
467 471anti-parallel
Strand 3
A
474 477anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 458first strand
Strand 2
A
484 485anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 493first strand
Strand 2
A
515 516anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il