Analysis of interatomic Contacts of Structural Units in PDB entry:
1U5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1U5T entry

There are 4 chains in PDB entry 1U5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 20GLN 232
B
LEU 396SER 564
C
SER 2ILE 199
D
SER 2ILE 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 1U5T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
22 50Right-handed alpha
Helix 2
2
A
57 72Right-handed alpha
Helix 3
3
A
74 79Right-handed alpha
Helix 4
4
A
82 86Right-handed 310
Helix 5
5
A
87 107Right-handed alpha
Helix 6
6
A
116 122Right-handed alpha
Helix 7
7
A
130 142Right-handed alpha
Helix 8
8
A
168 175Right-handed alpha
Helix 9
9
A
183 192Right-handed alpha
Helix 10
10
A
195 208Right-handed alpha
Helix 11
11
A
225 231Right-handed 310
Helix 12
12
B
406 421Right-handed alpha
Helix 13
13
B
438 447Right-handed alpha
Helix 14
14
B
456 465Right-handed alpha
Helix 15
15
B
466 471Right-handed 310
Helix 16
16
B
492 506Right-handed alpha
Helix 17
17
B
510 519Right-handed alpha
Helix 18
18
B
528 543Right-handed alpha
Helix 19
19
C
5 15Right-handed 310
Helix 20
20
C
19 39Right-handed alpha
Helix 21
21
C
86 99Right-handed alpha
Helix 22
22
C
127 143Right-handed alpha
Helix 23
23
C
150 155Right-handed alpha
Helix 24
24
C
169 178Right-handed alpha
Helix 25
25
D
6 14Right-handed 310
Helix 26
26
D
19 39Right-handed alpha
Helix 27
27
D
86 101Right-handed alpha
Helix 28
28
D
128 133Right-handed alpha
Helix 29
29
D
150 155Right-handed alpha
Helix 30
30
D
169 178Right-handed alpha
Helix 31
31
D
179 183Right-handed 310
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There are 7 sheets in PDB entry 1U5T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
114 115first strand
Strand 2
A
155 158anti-parallel
Strand 3
A
149 152anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
212 214first strand
Strand 2
A
222 224anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
435 436first strand
Strand 2
B
484 488anti-parallel
Strand 3
B
476 480anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
545 549first strand
Strand 2
B
554 558anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
45 46first strand
Strand 2
C
121 123anti-parallel
Strand 3
C
103 105anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
148 149first strand
Strand 2
C
197 198anti-parallel
Strand 3
C
187 188anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
45 46first strand
Strand 2
D
121 122anti-parallel
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