Analysis of interatomic Contacts of Structural Units in PDB entry:
1UG9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UG9 entry

There is 1 chain in PDB entry 1UG9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2PRO 1020
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 1UG9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 74Right-handed 310
Helix 2
2
A
139 142Right-handed 310
Helix 3
3
A
189 198Right-handed alpha
Helix 4
4
A
237 252Right-handed alpha
Helix 5
5
A
252 271Right-handed alpha
Helix 6
6
A
279 296Right-handed alpha
Helix 7
7
A
313 317Right-handed 310
Helix 8
8
A
330 345Right-handed alpha
Helix 9
9
A
346 361Right-handed alpha
Helix 10
10
A
385 399Right-handed alpha
Helix 11
11
A
402 409Right-handed alpha
Helix 12
12
A
409 421Right-handed alpha
Helix 13
13
A
437 457Right-handed alpha
Helix 14
14
A
459 475Right-handed alpha
Helix 15
15
A
476 481Right-handed alpha
Helix 16
16
A
521 523Right-handed 310
Helix 17
17
A
525 528Right-handed 310
Helix 18
18
A
529 534Right-handed alpha
Helix 19
19
A
541 555Right-handed alpha
Helix 20
20
A
592 605Right-handed alpha
Helix 21
21
A
609 619Right-handed alpha
Helix 22
22
A
653 670Right-handed alpha
Helix 23
23
A
676 684Right-handed alpha
Helix 24
24
A
859 862Right-handed 310
Helix 25
25
A
902 904Right-handed 310
Helix 26
26
A
914 916Right-handed 310
Helix 27
27
A
935 939Right-handed 310
Helix 28
28
A
949 955Right-handed alpha
Helix 29
29
A
957 964Right-handed alpha
Helix 30
30
A
998 1003Right-handed alpha
Helix 31
31
A
1004 1008Right-handed 310
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There are 14 sheets in PDB entry 1UG9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
34 38anti-parallel
Strand 3
A
41 46anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
55 63anti-parallel
Strand 3
A
130 137anti-parallel
Strand 4
A
212 218anti-parallel
Strand 5
A
179 184anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 81first strand
Strand 2
A
89 94anti-parallel
Strand 3
A
100 108anti-parallel
Strand 4
A
114 123anti-parallel
Strand 5
A
225 235anti-parallel
Strand 6
A
167 173anti-parallel
Strand 7
A
154 159anti-parallel
Strand 8
A
146 151anti-parallel
Strand 9
A
206 210anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 436first strand
Strand 2
A
497 498anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
A
493 494anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
517 519anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 559first strand
Strand 2
A
562 565anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
694 698first strand
Strand 2
A
709 716anti-parallel
Strand 3
A
738 744anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 704first strand
Strand 2
A
763 771parallel
Strand 3
A
749 757anti-parallel
Strand 4
A
720 725anti-parallel
Strand 5
A
728 732anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
775 781first strand
Strand 2
A
808 816anti-parallel
Strand 3
A
819 826anti-parallel
Strand 4
A
906 912anti-parallel
Strand 5
A
897 901anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 894first strand
Strand 2
A
884 886anti-parallel
Strand 3
A
872 877anti-parallel
Strand 4
A
842 849anti-parallel
Strand 5
A
925 932anti-parallel
Strand 6
A
990 991anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
892 894first strand
Strand 2
A
884 886anti-parallel
Strand 3
A
872 877anti-parallel
Strand 4
A
842 849anti-parallel
Strand 5
A
925 932anti-parallel
Strand 6
A
1016 1017anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
856 857first strand
Strand 2
A
864 866anti-parallel
Strand 3
A
1011 1013parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
946 948first strand
Strand 2
A
965 968parallel
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