Analysis of interatomic Contacts of Structural Units in PDB entry:
1UHG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UHG entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 23 chains in PDB entry 1UHG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 1ASP 67
A
ILE 69PRO 163
A
SER 165ALA 235
A
GLY 237GLU 319
A
LEU 321GLY 343
A
ALA 345PRO 385
B
GLY 1ASP 67
B
ILE 69PRO 163
B
SER 165ALA 235
B
GLY 237GLU 319
B
LEU 321GLY 343
B
ALA 345PRO 385
C
GLY 1ASP 67
C
ILE 69PRO 163
C
SER 165ALA 235
C
GLY 237GLU 319
C
LEU 321PRO 385
D
GLY 1ASP 67
D
ILE 69PRO 163
D
SER 165ALA 235
D
GLY 237GLU 319
D
LEU 321GLY 343
D
ALA 345PRO 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 53 helices in PDB entry 1UHG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 22Right-handed alpha
Helix 2
2
A
30 43Right-handed alpha
Helix 3
3
A
46 58Right-handed alpha
Helix 4
4
A
66 71Right-handed alpha
Helix 5
5
A
80 91Right-handed alpha
Helix 6
6
A
114 125Right-handed alpha
Helix 7
7
A
137 153Right-handed alpha
Helix 8
8
A
189 193Right-handed 310
Helix 9
9
A
223 225Right-handed 310
Helix 10
10
A
251 259Right-handed alpha
Helix 11
11
A
260 268Right-handed alpha
Helix 12
12
A
293 301Right-handed alpha
Helix 13
13
A
303 307Right-handed 310
Helix 14
14
A
343 352Right-handed alpha
Helix 15
15
B
2 22Right-handed alpha
Helix 16
16
B
30 43Right-handed alpha
Helix 17
17
B
46 58Right-handed alpha
Helix 18
18
B
68 72Right-handed 310
Helix 19
19
B
80 91Right-handed alpha
Helix 20
20
B
114 125Right-handed alpha
Helix 21
21
B
137 153Right-handed alpha
Helix 22
22
B
189 193Right-handed 310
Helix 23
23
B
251 259Right-handed alpha
Helix 24
24
B
260 268Right-handed alpha
Helix 25
25
B
293 301Right-handed alpha
Helix 26
26
B
303 307Right-handed 310
Helix 27
27
B
343 354Right-handed alpha
Helix 28
28
C
2 22Right-handed alpha
Helix 29
29
C
30 43Right-handed alpha
Helix 30
30
C
46 57Right-handed alpha
Helix 31
31
C
69 73Right-handed 310
Helix 32
32
C
80 92Right-handed alpha
Helix 33
33
C
114 125Right-handed alpha
Helix 34
34
C
137 153Right-handed alpha
Helix 35
35
C
189 193Right-handed 310
Helix 36
36
C
251 257Right-handed alpha
Helix 37
37
C
260 268Right-handed alpha
Helix 38
38
C
293 301Right-handed alpha
Helix 39
39
C
303 307Right-handed 310
Helix 40
40
D
2 22Right-handed alpha
Helix 41
41
D
30 43Right-handed alpha
Helix 42
42
D
46 58Right-handed alpha
Helix 43
43
D
69 73Right-handed 310
Helix 44
44
D
80 91Right-handed alpha
Helix 45
45
D
114 125Right-handed alpha
Helix 46
46
D
137 153Right-handed alpha
Helix 47
47
D
189 193Right-handed 310
Helix 48
48
D
248 250Right-handed 310
Helix 49
49
D
251 259Right-handed alpha
Helix 50
50
D
260 268Right-handed alpha
Helix 51
51
D
293 301Right-handed alpha
Helix 52
52
D
303 307Right-handed 310
Helix 53
53
D
343 354Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 1UHG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
27 29first strand
Strand 2
A
376 382anti-parallel
Strand 3
A
364 370anti-parallel
Strand 4
A
239 246anti-parallel
Strand 5
A
227 233anti-parallel
Strand 6
A
206 222anti-parallel
Strand 7
A
194 198anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
27 29first strand
Strand 2
A
376 382anti-parallel
Strand 3
A
364 370anti-parallel
Strand 4
A
239 246anti-parallel
Strand 5
A
227 233anti-parallel
Strand 6
A
206 222anti-parallel
Strand 7
A
274 283anti-parallel
Strand 8
A
357 359parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
129 132first strand
Strand 2
A
97 108parallel
Strand 3
A
172 182anti-parallel
Strand 4
A
323 334parallel
Strand 5
A
285 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
184 186first strand
Strand 2
A
338 340parallel
Back to list of sheets
Back to top of page

There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
27 29first strand
Strand 2
B
376 382anti-parallel
Strand 3
B
364 370anti-parallel
Strand 4
B
239 246anti-parallel
Strand 5
B
227 233anti-parallel
Strand 6
B
205 222anti-parallel
Strand 7
B
194 199anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
27 29first strand
Strand 2
B
376 382anti-parallel
Strand 3
B
364 370anti-parallel
Strand 4
B
239 246anti-parallel
Strand 5
B
227 233anti-parallel
Strand 6
B
205 222anti-parallel
Strand 7
B
274 283anti-parallel
Strand 8
B
357 359parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
129 132first strand
Strand 2
B
97 108parallel
Strand 3
B
172 182anti-parallel
Strand 4
B
325 334parallel
Strand 5
B
285 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
184 186first strand
Strand 2
B
338 340parallel
Back to list of sheets
Back to top of page

There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
27 29first strand
Strand 2
C
376 382anti-parallel
Strand 3
C
364 370anti-parallel
Strand 4
C
239 246anti-parallel
Strand 5
C
227 233anti-parallel
Strand 6
C
205 222anti-parallel
Strand 7
C
194 199anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
27 29first strand
Strand 2
C
376 382anti-parallel
Strand 3
C
364 370anti-parallel
Strand 4
C
239 246anti-parallel
Strand 5
C
227 233anti-parallel
Strand 6
C
205 222anti-parallel
Strand 7
C
274 283anti-parallel
Strand 8
C
357 359parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
129 132first strand
Strand 2
C
97 108parallel
Strand 3
C
172 182anti-parallel
Strand 4
C
323 334parallel
Strand 5
C
285 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
184 186first strand
Strand 2
C
338 340parallel
Back to list of sheets
Back to top of page

There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
27 29first strand
Strand 2
D
376 382anti-parallel
Strand 3
D
364 370anti-parallel
Strand 4
D
239 246anti-parallel
Strand 5
D
227 233anti-parallel
Strand 6
D
204 222anti-parallel
Strand 7
D
194 201anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
27 29first strand
Strand 2
D
376 382anti-parallel
Strand 3
D
364 370anti-parallel
Strand 4
D
239 246anti-parallel
Strand 5
D
227 233anti-parallel
Strand 6
D
204 222anti-parallel
Strand 7
D
274 283anti-parallel
Strand 8
D
357 359parallel
Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
129 132first strand
Strand 2
D
97 108parallel
Strand 3
D
172 182anti-parallel
Strand 4
D
325 334parallel
Strand 5
D
285 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
184 186first strand
Strand 2
D
338 340parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il