Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1URQ entry
There are 4 chains in PDB entry 1URQ
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
GLY 1051 | TYR 1108 |
B
|
GLU 196 | SER 259 |
C
|
ARG 16 | LYS 83 |
D
|
MET 138 | THR 199 |
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There are 4
helices in PDB entry 1URQ. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
Helix 1 |
1 | A
| 1052 |
1108 | Right-handed alpha |
Helix 2 |
2 | B
| 196 |
257 | Right-handed alpha |
Helix 3 |
3 | C
| 16 |
81 | Right-handed alpha |
Helix 4 |
4 | D
| 139 |
198 | Right-handed alpha |
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There are no sheets in PDB entry
1URQ
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il