Analysis of interatomic Contacts of Structural Units in PDB entry:
1UTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UTC entry

There are 4 chains in PDB entry 1UTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 4ASN 355
B
 GLN 3ASN 355
P
 THR 1TRP 7
Q
 THR 1TRP 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1UTC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 19Right-handed 310
Helix 2
2
A
21 25Right-handed 310
Helix 3
3
A
145 149Right-handed 310
Helix 4
4
A
333 341Right-handed alpha
Helix 5
5
A
344 355Right-handed alpha
Helix 6
6
B
16 19Right-handed 310
Helix 7
7
B
21 25Right-handed 310
Helix 8
8
B
145 149Right-handed 310
Helix 9
9
B
333 341Right-handed alpha
Helix 10
10
B
344 354Right-handed alpha
Helix 11
11
P
3 7Right-handed 310
Helix 12
12
Q
3 7Right-handed 310
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There are 14 sheets in PDB entry 1UTC. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, BG,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 14first strand
Strand 2
A
323 329anti-parallel
Strand 3
A
314 319anti-parallel
Strand 4
A
303 309anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 31first strand
Strand 2
A
37 44anti-parallel
Strand 3
A
47 54anti-parallel
Strand 4
A
62 65anti-parallel
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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 73first strand
Strand 2
A
79 84anti-parallel
Strand 3
A
87 92anti-parallel
Strand 4
A
97 103anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
118 122anti-parallel
Strand 3
A
126 131anti-parallel
Strand 4
A
139 143anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 158first strand
Strand 2
A
164 173anti-parallel
Strand 3
A
176 185anti-parallel
Strand 4
A
190 194anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 204first strand
Strand 2
A
213 222anti-parallel
Strand 3
A
225 232anti-parallel
Strand 4
A
246 249anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 267first strand
Strand 2
A
272 277anti-parallel
Strand 3
A
281 286anti-parallel
Strand 4
A
292 297anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 14first strand
Strand 2
B
323 329anti-parallel
Strand 3
B
314 319anti-parallel
Strand 4
B
303 309anti-parallel
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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
37 44anti-parallel
Strand 3
B
47 54anti-parallel
Strand 4
B
62 65anti-parallel
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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 73first strand
Strand 2
B
79 84anti-parallel
Strand 3
B
87 92anti-parallel
Strand 4
B
97 103anti-parallel
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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 113first strand
Strand 2
B
118 122anti-parallel
Strand 3
B
126 131anti-parallel
Strand 4
B
139 143anti-parallel
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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
152 158first strand
Strand 2
B
164 172anti-parallel
Strand 3
B
177 185anti-parallel
Strand 4
B
190 195anti-parallel
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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 204first strand
Strand 2
B
213 222anti-parallel
Strand 3
B
225 232anti-parallel
Strand 4
B
246 249anti-parallel
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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 267first strand
Strand 2
B
272 277anti-parallel
Strand 3
B
281 286anti-parallel
Strand 4
B
292 297anti-parallel
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