Analysis of interatomic Contacts of Structural Units in PDB entry:
1UUM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UUM entry

There are 2 chains in PDB entry 1UUM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 38ARG 396
B
 TYR 38ARG 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1UUM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 50Right-handed alpha
Helix 2
2
A
51 65Right-handed alpha
Helix 3
3
A
76 80Right-handed 310
Helix 4
4
A
104 111Right-handed alpha
Helix 5
5
A
138 140Right-handed 310
Helix 6
6
A
153 163Right-handed alpha
Helix 7
7
A
164 174Right-handed alpha
Helix 8
8
A
190 203Right-handed alpha
Helix 9
9
A
204 206Right-handed 310
Helix 10
10
A
226 243Right-handed alpha
Helix 11
11
A
261 276Right-handed alpha
Helix 12
12
A
295 300Right-handed 310
Helix 13
13
A
309 324Right-handed alpha
Helix 14
14
A
338 349Right-handed alpha
Helix 15
15
A
356 363Right-handed alpha
Helix 16
16
A
365 381Right-handed alpha
Helix 17
17
A
385 390Right-handed alpha
Helix 18
18
A
391 395Right-handed 310
Helix 19
19
B
38 50Right-handed alpha
Helix 20
20
B
51 65Right-handed alpha
Helix 21
21
B
76 80Right-handed 310
Helix 22
22
B
104 111Right-handed alpha
Helix 23
23
B
138 140Right-handed 310
Helix 24
24
B
153 164Right-handed alpha
Helix 25
25
B
164 174Right-handed alpha
Helix 26
26
B
190 203Right-handed alpha
Helix 27
27
B
204 206Right-handed 310
Helix 28
28
B
226 243Right-handed alpha
Helix 29
29
B
261 276Right-handed alpha
Helix 30
30
B
295 300Right-handed 310
Helix 31
31
B
309 324Right-handed alpha
Helix 32
32
B
338 349Right-handed alpha
Helix 33
33
B
356 363Right-handed alpha
Helix 34
34
B
365 381Right-handed alpha
Helix 35
35
B
385 390Right-handed alpha
Helix 36
36
B
391 395Right-handed 310
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There are 6 sheets in PDB entry 1UUM. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
86 88anti-parallel
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There are 9 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
350 355parallel
Strand 3
A
330 333parallel
Strand 4
A
279 282parallel
Strand 5
A
251 256parallel
Strand 6
A
208 212parallel
Strand 7
A
178 182parallel
Strand 8
A
115 121parallel
Strand 9
A
92 94parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 137first strand
Strand 2
A
142 145anti-parallel
Strand 3
A
303 306anti-parallel
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There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 83first strand
Strand 2
B
86 88anti-parallel
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There are 9 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
350 355parallel
Strand 3
B
330 333parallel
Strand 4
B
279 282parallel
Strand 5
B
251 256parallel
Strand 6
B
208 212parallel
Strand 7
B
178 182parallel
Strand 8
B
115 121parallel
Strand 9
B
92 94parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 137first strand
Strand 2
B
142 145anti-parallel
Strand 3
B
303 306anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il