Analysis of interatomic Contacts of Structural Units in PDB entry:
1UVH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UVH entry

There are 4 chains in PDB entry 1UVH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
THR 5GLY 161
B
THR 5GLY 161
C
THR 5GLY 161
D
THR 5GLY 161
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1UVH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 41Right-handed alpha
Helix 2
2
A
46 76Right-handed alpha
Helix 3
3
A
82 90Right-handed alpha
Helix 4
4
A
102 128Right-handed alpha
Helix 5
5
A
131 154Right-handed alpha
Helix 6
6
A
155 157Right-handed 310
Helix 7
7
B
10 42Right-handed alpha
Helix 8
8
B
46 76Right-handed alpha
Helix 9
9
B
82 90Right-handed alpha
Helix 10
10
B
101 130Right-handed alpha
Helix 11
11
B
131 155Right-handed alpha
Helix 12
12
C
10 42Right-handed alpha
Helix 13
13
C
46 76Right-handed alpha
Helix 14
14
C
82 90Right-handed alpha
Helix 15
15
C
101 130Right-handed alpha
Helix 16
16
C
131 154Right-handed alpha
Helix 17
17
D
12 42Right-handed alpha
Helix 18
18
D
46 76Right-handed alpha
Helix 19
19
D
82 90Right-handed alpha
Helix 20
20
D
101 129Right-handed alpha
Helix 21
21
D
131 154Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 1UVH.

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
42 43first strand
Strand 2
A
100 101parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il