Analysis of interatomic Contacts of Structural Units in PDB entry:
1UWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UWH entry

There are 2 chains in PDB entry 1UWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 447LYS 722
B
ASP 447LYS 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 1UWH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
492 505Right-handed alpha
Helix 2
2
A
536 542Right-handed alpha
Helix 3
3
A
548 569Right-handed alpha
Helix 4
4
A
577 579Right-handed 310
Helix 5
5
A
615 619Right-handed 310
Helix 6
6
A
620 625Right-handed alpha
Helix 7
7
A
633 651Right-handed alpha
Helix 8
8
A
660 670Right-handed alpha
Helix 9
9
A
676 680Right-handed 310
Helix 10
10
A
685 696Right-handed alpha
Helix 11
11
A
699 703Right-handed 310
Helix 12
12
A
705 719Right-handed alpha
Helix 13
13
B
492 505Right-handed alpha
Helix 14
14
B
536 542Right-handed alpha
Helix 15
15
B
548 569Right-handed alpha
Helix 16
16
B
577 579Right-handed 310
Helix 17
17
B
615 619Right-handed 310
Helix 18
18
B
620 625Right-handed alpha
Helix 19
19
B
633 651Right-handed alpha
Helix 20
20
B
660 670Right-handed alpha
Helix 21
21
B
676 680Right-handed 310
Helix 22
22
B
685 696Right-handed alpha
Helix 23
23
B
699 703Right-handed 310
Helix 24
24
B
705 719Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1UWH. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
461 464first strand
Strand 2
A
469 474anti-parallel
Strand 3
A
478 483anti-parallel
Strand 4
A
525 529anti-parallel
Strand 5
A
515 519anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
533 535first strand
Strand 2
A
581 584anti-parallel
Strand 3
A
589 591anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
461 465first strand
Strand 2
B
468 474anti-parallel
Strand 3
B
478 483anti-parallel
Strand 4
B
525 529anti-parallel
Strand 5
B
515 519anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
533 535first strand
Strand 2
B
581 584anti-parallel
Strand 3
B
589 591anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il