Analysis of interatomic Contacts of Structural Units in PDB entry:
1UWV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UWV entry

There is 1 chain in PDB entry 1UWV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 15VAL 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1UWV. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
96 113Right-handed alpha
Helix 2
2
A
166 181Right-handed alpha
Helix 3
3
A
182 187Right-handed 310
Helix 4
4
A
212 227Right-handed alpha
Helix 5
5
A
267 283Right-handed alpha
Helix 6
6
A
300 306Right-handed alpha
Helix 7
7
A
317 331Right-handed alpha
Helix 8
8
A
350 354Right-handed 310
Helix 9
9
A
369 380Right-handed alpha
Helix 10
10
A
390 404Right-handed alpha
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There are 4 sheets in PDB entry 1UWV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 24first strand
Strand 2
A
49 57anti-parallel
Strand 3
A
61 69anti-parallel
Strand 4
A
37 42parallel
Strand 5
A
29 34anti-parallel
Strand 6
A
17 24anti-parallel
Strand 7
A
17 24first strand
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There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
118 120first strand
Strand 2
A
407 414parallel
Strand 3
A
424 430anti-parallel
Strand 4
A
383 388anti-parallel
Strand 5
A
359 362parallel
Strand 6
A
289 293parallel
Strand 7
A
310 315parallel
Strand 8
A
336 340parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
156 158first strand
Strand 2
A
143 149anti-parallel
Strand 3
A
130 138anti-parallel
Strand 4
A
189 197anti-parallel
Strand 5
A
200 207anti-parallel
Strand 6
A
229 233parallel
Strand 7
A
240 243anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
248 251first strand
Strand 2
A
254 257anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il