Analysis of interatomic Contacts of Structural Units in PDB entry:
1VIN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VIN entry

There is 1 chain in PDB entry 1VIN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 181LEU 432
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1VIN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
182 193Right-handed alpha
Helix 2
2
A
199 202Right-handed 310
Helix 3
3
A
208 224Right-handed alpha
Helix 4
4
A
229 243Right-handed alpha
Helix 5
5
A
250 268Right-handed alpha
Helix 6
6
A
275 282Right-handed alpha
Helix 7
7
A
288 301Right-handed alpha
Helix 8
8
A
311 321Right-handed alpha
Helix 9
9
A
327 342Right-handed alpha
Helix 10
10
A
344 349Right-handed alpha
Helix 11
11
A
352 368Right-handed alpha
Helix 12
12
A
374 380Right-handed alpha
Helix 13
13
A
388 403Right-handed alpha
Helix 14
14
A
408 414Right-handed alpha
Helix 15
15
A
416 418Right-handed 310
Helix 16
16
A
421 423Right-handed 310
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There are no sheets in PDB entry 1VIN

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