Analysis of interatomic Contacts of Structural Units in PDB entry:
1VR2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VR2 entry

There is 1 chain in PDB entry 1VR2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 820ALA 1168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1VR2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
823 828Right-handed alpha
Helix 2
2
A
830 832Right-handed 310
Helix 3
3
A
875 893Right-handed alpha
Helix 4
4
A
924 930Right-handed alpha
Helix 5
5
A
1001 1022Right-handed alpha
Helix 6
6
A
1030 1032Right-handed 310
Helix 7
7
A
1067 1072Right-handed 310
Helix 8
8
A
1073 1078Right-handed alpha
Helix 9
9
A
1083 1100Right-handed alpha
Helix 10
10
A
1114 1121Right-handed alpha
Helix 11
11
A
1132 1143Right-handed alpha
Helix 12
12
A
1146 1150Right-handed 310
Helix 13
13
A
1152 1168Right-handed alpha
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There are 2 sheets in PDB entry 1VR2. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
834 841first strand
Strand 2
A
846 854anti-parallel
Strand 3
A
862 870anti-parallel
Strand 4
A
913 917anti-parallel
Strand 5
A
901 905anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
922 923first strand
Strand 2
A
1034 1036anti-parallel
Strand 3
A
1042 1044anti-parallel
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