Analysis of interatomic Contacts of Structural Units in PDB entry:
1W0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1W0O entry

There is 1 chain in PDB entry 1W0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 25THR 777
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1W0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 38Right-handed 310
Helix 2
2
A
39 44Right-handed 310
Helix 3
3
A
82 93Right-handed alpha
Helix 4
4
A
146 152Right-handed 310
Helix 5
5
A
279 283Right-handed 310
Helix 6
6
A
317 321Right-handed 310
Helix 7
7
A
348 353Right-handed alpha
Helix 8
8
A
433 438Right-handed alpha
Helix 9
9
A
508 513Right-handed alpha
Helix 10
10
A
608 610Right-handed 310
Helix 11
11
A
671 673Right-handed 310
Helix 12
12
A
758 760Right-handed 310
Helix 13
13
A
769 773Right-handed alpha
Helix 14
14
A
774 776Right-handed 310
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There are 16 sheets in PDB entry 1W0O. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
202 213anti-parallel
Strand 3
A
65 70anti-parallel
Strand 4
A
54 58anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
202 213anti-parallel
Strand 3
A
94 105anti-parallel
Strand 4
A
154 161anti-parallel
Strand 5
A
167 172anti-parallel
Strand 6
A
175 181anti-parallel
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There are 6 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
75 79anti-parallel
Strand 3
A
189 195anti-parallel
Strand 4
A
111 114anti-parallel
Strand 5
A
117 119anti-parallel
Strand 6
A
184 185anti-parallel
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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
121 125anti-parallel
Strand 3
A
131 135anti-parallel
Strand 4
A
142 145anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 219first strand
Strand 2
A
762 768anti-parallel
Strand 3
A
750 756anti-parallel
Strand 4
A
741 745anti-parallel
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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 230first strand
Strand 2
A
238 246anti-parallel
Strand 3
A
257 265anti-parallel
Strand 4
A
276 277anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 298first strand
Strand 2
A
303 312anti-parallel
Strand 3
A
329 336anti-parallel
Strand 4
A
346 347anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 298first strand
Strand 2
A
303 312anti-parallel
Strand 3
A
329 336anti-parallel
Strand 4
A
341 342anti-parallel
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There are 7 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 466first strand
Strand 2
A
453 458anti-parallel
Strand 3
A
441 448anti-parallel
Strand 4
A
380 391anti-parallel
Strand 5
A
487 498anti-parallel
Strand 6
A
357 361anti-parallel
Strand 7
A
536 539anti-parallel
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There are 6 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
461 466first strand
Strand 2
A
453 458anti-parallel
Strand 3
A
441 448anti-parallel
Strand 4
A
380 391anti-parallel
Strand 5
A
487 498anti-parallel
Strand 6
A
501 507anti-parallel
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There are 10 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 431first strand
Strand 2
A
417 421anti-parallel
Strand 3
A
403 411anti-parallel
Strand 4
A
469 470anti-parallel
Strand 5
A
403 411anti-parallel
Strand 6
A
528 533first strand
Strand 7
A
364 371anti-parallel
Strand 8
A
474 480anti-parallel
Strand 9
A
394 400anti-parallel
Strand 10
A
403 411anti-parallel
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There are 7 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
543 545first strand
Strand 2
A
568 575anti-parallel
Strand 3
A
552 553anti-parallel
Strand 4
A
568 575anti-parallel
Strand 5
A
595 599first strand
Strand 6
A
580 587anti-parallel
Strand 7
A
568 575anti-parallel
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There are 2 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
604 607first strand
Strand 2
A
611 614anti-parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 624first strand
Strand 2
A
630 637anti-parallel
Strand 3
A
650 655anti-parallel
Strand 4
A
663 669anti-parallel
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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 642first strand
Strand 2
A
645 646anti-parallel
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There are 4 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
684 689first strand
Strand 2
A
695 702anti-parallel
Strand 3
A
715 720anti-parallel
Strand 4
A
728 732anti-parallel
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