Analysis of interatomic Contacts of Structural Units in PDB entry:
1WG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WG8 entry

There are 2 chains in PDB entry 1WG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 4ALA 284
B
 THR 5ALA 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 1WG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 19Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
53 63Right-handed alpha
Helix 4
4
A
74 76Right-handed 310
Helix 5
5
A
77 85Right-handed alpha
Helix 6
6
A
100 106Right-handed alpha
Helix 7
7
A
107 110Right-handed 310
Helix 8
8
A
129 137Right-handed alpha
Helix 9
9
A
138 151Right-handed alpha
Helix 10
10
A
154 169Right-handed alpha
Helix 11
11
A
173 186Right-handed alpha
Helix 12
12
A
194 206Right-handed alpha
Helix 13
13
A
207 222Right-handed alpha
Helix 14
14
A
235 250Right-handed alpha
Helix 15
15
A
262 269Right-handed alpha
Helix 16
16
A
270 275Right-handed 310
Helix 17
17
B
10 19Right-handed alpha
Helix 18
18
B
34 43Right-handed alpha
Helix 19
19
B
53 63Right-handed alpha
Helix 20
20
B
74 76Right-handed 310
Helix 21
21
B
77 85Right-handed alpha
Helix 22
22
B
100 105Right-handed alpha
Helix 23
23
B
106 110Right-handed 310
Helix 24
24
B
129 137Right-handed alpha
Helix 25
25
B
138 151Right-handed alpha
Helix 26
26
B
154 169Right-handed alpha
Helix 27
27
B
173 186Right-handed alpha
Helix 28
28
B
194 206Right-handed alpha
Helix 29
29
B
207 222Right-handed alpha
Helix 30
30
B
235 248Right-handed alpha
Helix 31
31
B
262 269Right-handed alpha
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There are 2 sheets in PDB entry 1WG8. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
46 51parallel
Strand 3
A
25 28parallel
Strand 4
A
90 96parallel
Strand 5
A
223 233parallel
Strand 6
A
276 281anti-parallel
Strand 7
A
252 253anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 72first strand
Strand 2
B
46 51parallel
Strand 3
B
25 28parallel
Strand 4
B
90 96parallel
Strand 5
B
223 233parallel
Strand 6
B
276 281anti-parallel
Strand 7
B
252 253anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il