Analysis of interatomic Contacts of Structural Units in PDB entry:
1WOI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WOI entry

There are 6 chains in PDB entry 1WOI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3LEU 305
B
 GLY 3LEU 305
C
 GLY 3LEU 305
D
 GLY 3LEU 305
E
 GLY 3LEU 305
F
 GLY 3LEU 305
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 89 helices in PDB entry 1WOI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 18Right-handed 310
Helix 2
2
A
47 49Right-handed 310
Helix 3
3
A
50 60Right-handed alpha
Helix 4
4
A
92 109Right-handed alpha
Helix 5
5
A
120 122Right-handed 310
Helix 6
6
A
123 129Right-handed alpha
Helix 7
7
A
130 132Right-handed 310
Helix 8
8
A
161 170Right-handed alpha
Helix 9
9
A
187 197Right-handed alpha
Helix 10
10
A
204 210Right-handed alpha
Helix 11
11
A
210 216Right-handed alpha
Helix 12
12
A
231 233Right-handed 310
Helix 13
13
A
250 265Right-handed alpha
Helix 14
14
A
276 280Right-handed 310
Helix 15
15
A
283 303Right-handed alpha
Helix 16
16
B
14 18Right-handed 310
Helix 17
17
B
47 49Right-handed 310
Helix 18
18
B
50 60Right-handed alpha
Helix 19
19
B
92 109Right-handed alpha
Helix 20
20
B
120 122Right-handed 310
Helix 21
21
B
123 129Right-handed alpha
Helix 22
22
B
130 132Right-handed 310
Helix 23
23
B
161 168Right-handed alpha
Helix 24
24
B
187 197Right-handed alpha
Helix 25
25
B
204 210Right-handed alpha
Helix 26
26
B
210 216Right-handed alpha
Helix 27
27
B
231 233Right-handed 310
Helix 28
28
B
250 265Right-handed alpha
Helix 29
29
B
276 280Right-handed 310
Helix 30
30
B
283 302Right-handed alpha
Helix 31
31
C
14 18Right-handed 310
Helix 32
32
C
47 49Right-handed 310
Helix 33
33
C
50 60Right-handed alpha
Helix 34
34
C
92 110Right-handed alpha
Helix 35
35
C
120 122Right-handed 310
Helix 36
36
C
123 129Right-handed alpha
Helix 37
37
C
130 132Right-handed 310
Helix 38
38
C
161 170Right-handed alpha
Helix 39
39
C
187 197Right-handed alpha
Helix 40
40
C
204 210Right-handed alpha
Helix 41
41
C
210 216Right-handed alpha
Helix 42
42
C
231 233Right-handed 310
Helix 43
43
C
250 265Right-handed alpha
Helix 44
44
C
276 280Right-handed 310
Helix 45
45
C
283 303Right-handed alpha
Helix 46
46
D
14 18Right-handed 310
Helix 47
47
D
47 49Right-handed 310
Helix 48
48
D
50 60Right-handed alpha
Helix 49
49
D
92 109Right-handed alpha
Helix 50
50
D
120 122Right-handed 310
Helix 51
51
D
123 129Right-handed alpha
Helix 52
52
D
130 132Right-handed 310
Helix 53
53
D
161 170Right-handed alpha
Helix 54
54
D
187 197Right-handed alpha
Helix 55
55
D
204 210Right-handed alpha
Helix 56
56
D
210 216Right-handed alpha
Helix 57
57
D
231 233Right-handed 310
Helix 58
58
D
250 264Right-handed alpha
Helix 59
59
D
276 280Right-handed 310
Helix 60
60
D
283 302Right-handed alpha
Helix 61
61
E
14 18Right-handed 310
Helix 62
62
E
47 49Right-handed 310
Helix 63
63
E
50 60Right-handed alpha
Helix 64
64
E
92 109Right-handed alpha
Helix 65
65
E
120 122Right-handed 310
Helix 66
66
E
123 129Right-handed alpha
Helix 67
67
E
130 132Right-handed 310
Helix 68
68
E
161 170Right-handed alpha
Helix 69
69
E
187 197Right-handed alpha
Helix 70
70
E
204 216Right-handed alpha
Helix 71
71
E
231 233Right-handed 310
Helix 72
72
E
250 264Right-handed alpha
Helix 73
73
E
276 280Right-handed 310
Helix 74
74
E
283 301Right-handed alpha
Helix 75
75
F
14 18Right-handed 310
Helix 76
76
F
47 49Right-handed 310
Helix 77
77
F
50 60Right-handed alpha
Helix 78
78
F
92 109Right-handed alpha
Helix 79
79
F
120 122Right-handed 310
Helix 80
80
F
123 129Right-handed alpha
Helix 81
81
F
130 132Right-handed 310
Helix 82
82
F
161 170Right-handed alpha
Helix 83
83
F
187 197Right-handed alpha
Helix 84
84
F
204 210Right-handed alpha
Helix 85
85
F
210 217Right-handed alpha
Helix 86
86
F
231 233Right-handed 310
Helix 87
87
F
250 265Right-handed alpha
Helix 88
88
F
276 280Right-handed 310
Helix 89
89
F
283 304Right-handed alpha
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There are 12 sheets in PDB entry 1WOI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 85first strand
Strand 2
A
29 36parallel
Strand 3
A
111 118parallel
Strand 4
A
266 273parallel
Strand 5
A
223 229parallel
Strand 6
A
137 142parallel
Strand 7
A
173 181parallel
Strand 8
A
200 203parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
73 74anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 85first strand
Strand 2
B
29 36parallel
Strand 3
B
111 118parallel
Strand 4
B
266 273parallel
Strand 5
B
223 229parallel
Strand 6
B
137 142parallel
Strand 7
B
173 181parallel
Strand 8
B
200 203parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
73 74anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 85first strand
Strand 2
C
29 36parallel
Strand 3
C
111 118parallel
Strand 4
C
266 273parallel
Strand 5
C
223 229parallel
Strand 6
C
137 142parallel
Strand 7
C
173 181parallel
Strand 8
C
200 203parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
66 67first strand
Strand 2
C
73 74anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 85first strand
Strand 2
D
29 36parallel
Strand 3
D
111 118parallel
Strand 4
D
266 273parallel
Strand 5
D
223 229parallel
Strand 6
D
137 142parallel
Strand 7
D
173 181parallel
Strand 8
D
200 203parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
66 67first strand
Strand 2
D
73 74anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
80 85first strand
Strand 2
E
29 36parallel
Strand 3
E
111 118parallel
Strand 4
E
266 273parallel
Strand 5
E
223 229parallel
Strand 6
E
137 142parallel
Strand 7
E
173 181parallel
Strand 8
E
200 203parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
66 67first strand
Strand 2
E
73 74anti-parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
80 85first strand
Strand 2
F
29 36parallel
Strand 3
F
111 118parallel
Strand 4
F
266 273parallel
Strand 5
F
223 229parallel
Strand 6
F
137 142parallel
Strand 7
F
173 181parallel
Strand 8
F
200 203parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
66 67first strand
Strand 2
F
73 74anti-parallel
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