Analysis of interatomic Contacts of Structural Units in PDB entry:
1WOK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WOK entry

There are 4 chains in PDB entry 1WOK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 662THR 1011
B
 LYS 662THR 1011
C
 LYS 662THR 1011
D
 LYS 662THR 1011
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 1WOK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
666 676Right-handed alpha
Helix 2
2
A
678 689Right-handed alpha
Helix 3
3
A
697 701Right-handed 310
Helix 4
4
A
702 722Right-handed alpha
Helix 5
5
A
725 738Right-handed alpha
Helix 6
6
A
758 778Right-handed alpha
Helix 7
7
A
788 798Right-handed alpha
Helix 8
8
A
808 821Right-handed alpha
Helix 9
9
A
848 852Right-handed 310
Helix 10
10
A
865 876Right-handed alpha
Helix 11
11
A
885 889Right-handed 310
Helix 12
12
A
900 906Right-handed alpha
Helix 13
13
A
907 909Right-handed 310
Helix 14
14
A
958 961Right-handed 310
Helix 15
15
A
993 995Right-handed 310
Helix 16
16
B
666 677Right-handed alpha
Helix 17
17
B
678 689Right-handed alpha
Helix 18
18
B
697 701Right-handed 310
Helix 19
19
B
702 721Right-handed alpha
Helix 20
20
B
726 740Right-handed alpha
Helix 21
21
B
758 779Right-handed alpha
Helix 22
22
B
788 795Right-handed alpha
Helix 23
23
B
808 821Right-handed alpha
Helix 24
24
B
843 849Right-handed alpha
Helix 25
25
B
850 854Right-handed 310
Helix 26
26
B
865 876Right-handed alpha
Helix 27
27
B
900 906Right-handed alpha
Helix 28
28
B
958 961Right-handed 310
Helix 29
29
B
993 995Right-handed 310
Helix 30
30
C
666 677Right-handed alpha
Helix 31
31
C
679 689Right-handed alpha
Helix 32
32
C
697 701Right-handed 310
Helix 33
33
C
702 721Right-handed alpha
Helix 34
34
C
725 740Right-handed alpha
Helix 35
35
C
755 779Right-handed alpha
Helix 36
36
C
788 798Right-handed alpha
Helix 37
37
C
808 821Right-handed alpha
Helix 38
38
C
844 849Right-handed alpha
Helix 39
39
C
850 854Right-handed 310
Helix 40
40
C
865 867Right-handed 310
Helix 41
41
C
868 876Right-handed alpha
Helix 42
42
C
885 889Right-handed 310
Helix 43
43
C
900 906Right-handed alpha
Helix 44
44
C
958 961Right-handed 310
Helix 45
45
C
993 995Right-handed 310
Helix 46
46
D
666 678Right-handed alpha
Helix 47
47
D
680 689Right-handed alpha
Helix 48
48
D
697 701Right-handed 310
Helix 49
49
D
702 715Right-handed alpha
Helix 50
50
D
716 723Right-handed alpha
Helix 51
51
D
725 740Right-handed alpha
Helix 52
52
D
755 777Right-handed alpha
Helix 53
53
D
788 795Right-handed alpha
Helix 54
54
D
796 798Right-handed 310
Helix 55
55
D
809 821Right-handed alpha
Helix 56
56
D
844 849Right-handed alpha
Helix 57
57
D
850 853Right-handed 310
Helix 58
58
D
870 875Right-handed alpha
Helix 59
59
D
885 889Right-handed 310
Helix 60
60
D
900 906Right-handed alpha
Helix 61
61
D
993 995Right-handed 310
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There are 14 sheets in PDB entry 1WOK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
799 803first strand
Strand 2
A
830 841anti-parallel
Strand 3
A
997 1008anti-parallel
Strand 4
A
916 925anti-parallel
Strand 5
A
857 864anti-parallel
Strand 6
A
967 968parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
895 897first strand
Strand 2
A
988 991anti-parallel
Strand 3
A
948 950anti-parallel
Strand 4
A
930 932parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
954 956first strand
Strand 2
A
974 976anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
802 803first strand
Strand 2
B
829 838anti-parallel
Strand 3
B
997 1009anti-parallel
Strand 4
B
916 925anti-parallel
Strand 5
B
857 864anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
895 897first strand
Strand 2
B
988 991anti-parallel
Strand 3
B
947 950anti-parallel
Strand 4
B
929 932parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
954 956first strand
Strand 2
B
974 976anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
799 803first strand
Strand 2
C
837 841anti-parallel
Strand 3
C
997 1006anti-parallel
Strand 4
C
916 925anti-parallel
Strand 5
C
857 863anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
829 830first strand
Strand 2
C
1008 1009anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
895 897first strand
Strand 2
C
988 991anti-parallel
Strand 3
C
948 950anti-parallel
Strand 4
C
931 932parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
954 956first strand
Strand 2
C
974 976anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
962 963first strand
Strand 2
C
968 969anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
857 860first strand
Strand 2
D
921 925anti-parallel
Strand 3
D
997 1001anti-parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
895 897first strand
Strand 2
D
988 991anti-parallel
Strand 3
D
948 950anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
916 917first strand
Strand 2
D
1005 1006anti-parallel
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